NCU02558 (Neurospora crassa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 NCU02558 T259229_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.771 0.771
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.771 0.771
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NCU02558 MADS box 10 57

Links

Other MADS box family TFs
Other Neurospora crassa TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF398 Homo sapiens ENSG00000197024 D
ZNF398 Oryctolagus cuniculus ENSOCUG00000008416 I
Myotis_brandtii_ZNF398_10025637 Myotis brandtii Myotis_brandtii_ZNF398_10025637 I
ENSP00000338984 Macaca fascicularis ENSP00000338984 I
ENSTSYG00000002784 Tarsius syrichta ENSTSYG00000002784 I
ENSSTOG00000013384 Ictidomys tridecemlineatus ENSSTOG00000013384 I
Zfp398 Rattus norvegicus ENSRNOG00000006703 I
ZNF398 Pteropus vampyrus ENSPVAG00000010865 I
ZNF398 Pan troglodytes ENSPTRG00000023917 I
ENSPPYG00000018150 Pongo abelii ENSPPYG00000018150 I
ENSPANG00000015944 Papio anubis ENSPANG00000015944 I
ZNF398 Ochotona princeps ENSOPRG00000010531 I
ZNF398 Otolemur garnettii ENSOGAG00000016740 I
ZNF398 Bos taurus ENSBTAG00000020445 I
ENSNLEG00000003700 Nomascus leucogenys ENSNLEG00000003700 I
Zfp398 Mus musculus ENSMUSG00000062519 I
ENSMPUG00000006622 Mustela putorius furo ENSMPUG00000006622 I
ZNF398 Myotis lucifugus ENSMLUG00000007451 I
ZNF398 Gorilla gorilla ENSGGOG00000005812 I
ZNF398 Dasypus novemcinctus ENSDNOG00000038814 I
ENSCSAG00000007015 Chlorocebus sabaeus ENSCSAG00000007015 I
ZNF398 Callithrix jacchus ENSCJAG00000010213 I
ZNF398 Choloepus hoffmanni ENSCHOG00000007407 I
ZNF398 Canis familiaris ENSCAFG00000004429 I