LjSGA_057783.1 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_057783.1 T259387_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.778 0.778
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_057783.1 MADS box 1 28

Links

Other MADS box family TFs
Other Lotus japonicus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra039294 Brassica rapa Bra039294 N 0.000
PGSC0003DMG401012197 Solanum tuberosum PGSC0003DMG401012197 N 0.000
Solyc08g081290.2 Solanum lycopersicum Solyc08g081290.2 N 0.000