ECANG7_07506 (Echinococcus canadensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 ECANG7_07506 T259561_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.708 0.708
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.708 0.708
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.708 0.708
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.708 0.708
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.708 0.708
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.708 0.708
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.708 0.708
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.708 0.708
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.708 0.708
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.708 0.708
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.708 0.708
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.708 0.708
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.708 0.708
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.708 0.708
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.708 0.708
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.708 0.708
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.708 0.708
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.708 0.708
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.708 0.708
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.708 0.708
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.708 0.708
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.708 0.708
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ECANG7_07506 MADS box 61 108

Links

Other MADS box family TFs
Other Echinococcus canadensis TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IKZF2 Homo sapiens ENSG00000030419 D 0.000
IKZF2 Anolis carolinensis ENSACAG00000025864 I 0.000
ENSAMEG00000003228 Ailuropoda melanoleuca ENSAMEG00000003228 I 0.000
ENSAMEG00000008058 Ailuropoda melanoleuca ENSAMEG00000008058 I 0.000
IKZF4 Bos taurus ENSBTAG00000012636 I 0.000
IKZF2 Canis familiaris ENSCAFG00000014224 I 0.000
IKZF4 Canis familiaris ENSCAFG00000030801 I 0.000
IKZF4 Callithrix jacchus ENSCJAG00000006230 I 0.000
IKZF2 Callithrix jacchus ENSCJAG00000011409 I 0.000
IKZF4 Cavia porcellus ENSCPOG00000009964 I 0.000
IKZF2 Cavia porcellus ENSCPOG00000013506 I 0.000
ENSCSAG00000005270 Chlorocebus sabaeus ENSCSAG00000005270 I 0.000
IKZF4 Dasypus novemcinctus ENSDNOG00000037824 I 0.000
Ikzf2 Dipodomys ordii ENSDORG00000007539 I 0.000
Ikzf4 Dipodomys ordii ENSDORG00000015397 I 0.000
IKZF4 Equus caballus ENSECAG00000024175 I 0.000
IKZF2 Erinaceus europaeus ENSEEUG00000001089 I 0.000
IKZF4 Erinaceus europaeus ENSEEUG00000006871 I 0.000
IKZF2 Echinops telfairi ENSETEG00000019814 I 0.000
ENSFALG00000012948 Ficedula albicollis ENSFALG00000012948 I 0.000
IKZF2 Felis catus ENSFCAG00000009654 I 0.000
IKZF4 Felis catus ENSFCAG00000029852 I 0.000
IKZF4 Homo sapiens ENSG00000123411 I 0.000
IKZF2 Gallus gallus ENSGALG00000003136 I 0.000
IKZF2 Gorilla gorilla ENSGGOG00000011301 I 0.000
IKZF4 Gorilla gorilla ENSGGOG00000011558 I 0.000
IKZF2 Loxodonta africana ENSLAFG00000008236 I 0.000
IKZF4 Loxodonta africana ENSLAFG00000026742 I 0.000
ENSMEUG00000000683 Macropus eugenii ENSMEUG00000000683 I 0.000
ENSMGAG00000003697 Meleagris gallopavo ENSMGAG00000003697 I 0.000
ENSMGAG00000010066 Meleagris gallopavo ENSMGAG00000010066 I 0.000
IKZF4 Microcebus murinus ENSMICG00000011029 I 0.000
IKZF2 Microcebus murinus ENSMICG00000013862 I 0.000
IKZF2 Myotis lucifugus ENSMLUG00000012494 I 0.000
IKZF4 Myotis lucifugus ENSMLUG00000026014 I 0.000
IKZF2 Macaca mulatta ENSMMUG00000000381 I 0.000
IKZF4 Macaca mulatta ENSMMUG00000007523 I 0.000
ENSMPUG00000000964 Mustela putorius furo ENSMPUG00000000964 I 0.000
Ikzf4 Mus musculus ENSMUSG00000002578 I 0.000
Ikzf2 Mus musculus ENSMUSG00000025997 I 0.000
ENSNLEG00000007199 Nomascus leucogenys ENSNLEG00000007199 I 0.000
ENSNLEG00000017564 Nomascus leucogenys ENSNLEG00000017564 I 0.000
ENSOARG00000010565 Ovis aries ENSOARG00000010565 I 0.000
ENSOARG00000019252 Ovis aries ENSOARG00000019252 I 0.000
IKZF2 Oryctolagus cuniculus ENSOCUG00000007309 I 0.000
IKZF4 Oryctolagus cuniculus ENSOCUG00000012558 I 0.000
IKZF2 Otolemur garnettii ENSOGAG00000016680 I 0.000
IKZF4 Otolemur garnettii ENSOGAG00000034375 I 0.000
IKZF4 Ochotona princeps ENSOPRG00000007904 I 0.000
ENSPANG00000016694 Papio anubis ENSPANG00000016694 I 0.000
IKZF4 Procavia capensis ENSPCAG00000010641 I 0.000
ENSPPYG00000013139 Pongo abelii ENSPPYG00000013139 I 0.000
ENSPSIG00000014940 Pelodiscus sinensis ENSPSIG00000014940 I 0.000
IKZF4 Pan troglodytes ENSPTRG00000005074 I 0.000
IKZF2 Pan troglodytes ENSPTRG00000012884 I 0.000
IKZF4 Pteropus vampyrus ENSPVAG00000007558 I 0.000
IKZF2 Pteropus vampyrus ENSPVAG00000014197 I 0.000
Ikzf4 Rattus norvegicus ENSRNOG00000005535 I 0.000
Ikzf2 Rattus norvegicus ENSRNOG00000027430 I 0.000
IKZF2 Sus scrofa ENSSSCG00000016164 I 0.000
ENSSTOG00000010547 Ictidomys tridecemlineatus ENSSTOG00000010547 I 0.000
ENSSTOG00000011683 Ictidomys tridecemlineatus ENSSTOG00000011683 I 0.000
IKZF2 Tupaia belangeri ENSTBEG00000010122 I 0.000
IKZF2 Taeniopygia guttata ENSTGUG00000002874 I 0.000
ENSTSYG00000006472 Tarsius syrichta ENSTSYG00000006472 I 0.000
IKZF2 Vicugna pacos ENSVPAG00000004262 I 0.000
Aan_R005612 Calypte anna Aan_R005612 I 0.000
Aan_R015421 Calypte anna Aan_R015421 I 0.000
Afo_R007273 Aptenodytes forsteri Afo_R007273 I 0.000
Brh_R001017 Buceros rhinoceros Brh_R001017 I 0.000
Cmyd_10006949 Chelonia mydas Cmyd_10006949 I 0.000
ENSP00000262032-D1 Bos grunniens ENSP00000262032-D1 I 0.000
ENSP00000262032 Macaca fascicularis ENSP00000262032 I 0.000
ENSP00000342876-D1 Bos grunniens ENSP00000342876-D1 I 0.000
ENSP00000342876 Macaca fascicularis ENSP00000342876 I 0.000
Gfo_R012078 Geospiza fortis Gfo_R012078 I 0.000
Myotis_brandtii_IKZF4_10009162 Myotis brandtii Myotis_brandtii_IKZF4_10009162 I 0.000
Pvit_13083 Pogona vitticeps Pvit_13083 I 0.000
Tal_R002368 Tyto alba Tal_R002368 I 0.000
ikzf2 Xenopus tropicalis XB-GENE-1013632 I 0.000
ENSAMXG00000012992 Astyanax mexicanus ENSAMXG00000012992 N 0.000
ENSAPLG00000016341 Anas platyrhynchos ENSAPLG00000016341 N 0.000
IKZF4 Danio rerio ENSDARG00000037068 N 0.000
IKZF4 Echinops telfairi ENSETEG00000018642 N 0.000
IKZF4 Gasterosteus aculeatus ENSGACG00000000739 N 0.000
si:dkey-166n8.9 Gasterosteus aculeatus ENSGACG00000009112 N 0.000
ENSGMOG00000004722 Gadus morhua ENSGMOG00000004722 N 0.000
ENSGMOG00000007568 Gadus morhua ENSGMOG00000007568 N 0.000
IKZF4 Monodelphis domestica ENSMODG00000001780 N 0.000
ENSONIG00000012141 Oreochromis niloticus ENSONIG00000012141 N 0.000
ENSONIG00000019065 Oreochromis niloticus ENSONIG00000019065 N 0.000
IKZF4 Oryzias latipes ENSORLG00000001555 N 0.000
si:dkey-166n8.9 Oryzias latipes ENSORLG00000007632 N 0.000
ENSPFOG00000001552 Poecilia formosa ENSPFOG00000001552 N 0.000
ENSPFOG00000023810 Poecilia formosa ENSPFOG00000023810 N 0.000
ENSPSIG00000003074 Pelodiscus sinensis ENSPSIG00000003074 N 0.000
ENSSHAG00000007337 Sarcophilus harrisii ENSSHAG00000007337 N 0.000
IKZF4 Tetraodon nigroviridis ENSTNIG00000014592 N 0.000
si:dkey-166n8.9 Takifugu rubripes ENSTRUG00000011798 N 0.000
IKZF4 Takifugu rubripes ENSTRUG00000012076 N 0.000
ENSXMAG00000011156 Xiphophorus maculatus ENSXMAG00000011156 N 0.000
Alligator_sinensis_CCG000741.1 Alligator sinensis Alligator_sinensis_CCG000741.1 N 0.000
Cmyd_10003867 Chelonia mydas Cmyd_10003867 N 0.000
Ogr17485 Ophisaurus gracilis Ogr17485 N 0.000
Pvit_00621 Pogona vitticeps Pvit_00621 N 0.000
ikzf4 Xenopus tropicalis XB-GENE-1219102 N 0.000
ikzf4.S Xenopus laevis XB-GENE-1219106 N 0.000