CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMLALPHA1
(
Saccharomyces cerevisiae
)
MATalpha_HMGbox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04769 (MATalpha_HMGbox)
IPR006856
YCL066W
T259801_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MATALPHA1
M08591_2.00
Saccharomyces cerevisiae
NTTCNTNATTNGNNNNNCAATN
NATTGNNNNNCNAATNANGAAN
Misc
DeBoer et al.(2011)
YCR040W_1418
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YCL066W
MATalpha_HMGbox
47
150
LKKDIQIPVPSSRFLNKIQIHRIASGSQNTQFRQFNKTSIKSSKKYLNSFMAFRAYYSQFGSGVKQNVLSSLLAEEWHADKMQHGIWDYFAQQYNFINPGFGFV
Links
Other
MATalpha_HMGbox
family TFs
Other
Saccharomyces cerevisiae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g11917
Steinernema carpocapsae
L596_g11917
N
L596_g12950
Steinernema carpocapsae
L596_g12950
N
L596_g17654
Steinernema carpocapsae
L596_g17654
N
L596_g5493
Steinernema carpocapsae
L596_g5493
N
L596_g779
Steinernema carpocapsae
L596_g779
N
L892_g13874
Steinernema scapterisci
L892_g13874
N