MECP2 (Cavia porcellus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSCPOG00000012579 T260090_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecp2
M00806_2.00 		Mus musculus
NNNNNHAHNN
NNDTDNNNNN		 PBM
Weirauch et al.(2013)
pTH3054 		1.000 1.000
MECP2
M09257_2.00 		Homo sapiens
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C 		1.000 1.000
Mecp2
M09259_2.00 		Mus musculus
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C 		1.000 1.000
MECP2
M11032_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_01 		1.000 1.000
MECP2
M11033_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_02 		1.000 1.000
MECP2
M11034_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4_01 		1.000 1.000
MECP2
M11035_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000011316 MBD 90 161

Links

Other MBD family TFs
Other Cavia porcellus TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPPG_00178 Spizellomyces punctatus SPPG_00178 I
ACYPI000672 Acyrthosiphon pisum ACYPI000672 I
ACYPI066865 Acyrthosiphon pisum ACYPI066865 I
ALNC14_015160 Albugo laibachii ALNC14_015160 I
AMTR_s00077p00037200 Amborella trichopoda AMTR_s00077p00037200 I
AMTR_s00161p00047190 Amborella trichopoda AMTR_s00161p00047190 I
DPB Arabidopsis thaliana AT5G03415 I
BGIBMGA006232 Bombyx mori BGIBMGA006232 I
BGIOSGA011873 Oryza indica BGIOSGA011873 I
BGIOSGA031841 Oryza indica BGIOSGA031841 I
Bo2g004050 Brassica oleracea Bo2g004050 I
Bo9g181990 Brassica oleracea Bo9g181990 I
Bra009530 Brassica rapa Bra009530 I
BRADI1G74890 Brachypodium distachyon BRADI1G74890 I
BRADI3G27520 Brachypodium distachyon BRADI3G27520 I
F443_09923 Phytophthora parasitica F443_09923 I
F775_18467 Aegilops tauschii F775_18467 I
F775_24235 Aegilops tauschii F775_24235 I
Dp Drosophila melanogaster FBgn0011763 I
GA18332 Drosophila pseudoobscura FBgn0078337 I
GF11948 Drosophila ananassae FBgn0088987 I
GG20367 Drosophila erecta FBgn0112558 I
GH20730 Drosophila grimshawi FBgn0128193 I
GI20813 Drosophila mojavensis FBgn0143548 I
GM21454 Drosophila sechellia FBgn0176335 I
GD10952 Drosophila simulans FBgn0182715 I
GJ20546 Drosophila virilis FBgn0207686 I
GK22007 Drosophila willistoni FBgn0223992 I
GE12526 Drosophila yakuba FBgn0230263 I
DPB Arabidopsis lyrata fgenesh2_kg.6__250__AT5G03415.1 I
fgenesh_scip_prom.46568.5077 Phytophthora kernoviae fgenesh_scip_prom.46568.5077 I
GLOINDRAFT_340940 Rhizophagus irregularis GLOINDRAFT_340940 I
GLYMA01G43800 Glycine max GLYMA01G43800 I
GLYMA11G01270 Glycine max GLYMA11G01270 I
GRMZM2G063387 Zea mays GRMZM2G063387 I
GRMZM2G086072 Zea mays GRMZM2G086072 I
GRMZM2G462623 Zea mays GRMZM2G462623 I
GSMUA_Achr1G00430_001 Musa acuminata GSMUA_Achr1G00430_001 I
GSMUA_Achr5G12510_001 Musa acuminata GSMUA_Achr5G12510_001 I
GUITHDRAFT_133922 Guillardia theta GUITHDRAFT_133922 I
HpaG800423 Hyaloperonospora arabidopsidis HpaG800423 I
LPERR03G03690 Leersia perrieri LPERR03G03690 I
maker-pag1_scaffold_76-snap-gene-0.44 Pythium aphanidermatum maker-pag1_scaffold_76-snap-gene-0.44 I
maker-par_contig_3316-snap-gene-0.4 Pythium arrhenomanes maker-par_contig_3316-snap-gene-0.4 I
maker-pir_contig_483-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_483-fgenesh-gene-0.6 I
maker-piw_contig_141-snap-gene-0.22 Pythium iwayamai maker-piw_contig_141-snap-gene-0.22 I
maker-pve_contig_507-snap-gene-0.12 Pythium vexans maker-pve_contig_507-snap-gene-0.12 I
MLOC_79152 Hordeum vulgare MLOC_79152 I
MTR_4g077797 Medicago truncatula MTR_4g077797 I
MTR_4g077803 Medicago truncatula MTR_4g077803 I
O9G_005043 Rozella allomycis O9G_005043 I
OB03G14110 Oryza brachyantha OB03G14110 I
OB10G18700 Oryza brachyantha OB10G18700 I
OBART03G04060 Oryza barthii OBART03G04060 I
OBART10G11350 Oryza barthii OBART10G11350 I
OGLUM10G11120 Oryza glumaepatula OGLUM10G11120 I
OLONG_008291 Oryza longistaminata OLONG_008291 I
OLONG_012861 Oryza longistaminata OLONG_012861 I
OMERI10G08380 Oryza meridionalis OMERI10G08380 I
ONIVA10G10530 Oryza nivara ONIVA10G10530 I
OPUNC03G03730 Oryza punctata OPUNC03G03730 I
OPUNC10G09700 Oryza punctata OPUNC10G09700 I
ORGLA03G0038000 Oryza glaberrima ORGLA03G0038000 I
ORGLA10G0100200 Oryza glaberrima ORGLA10G0100200 I
ORUFI10G11860 Oryza rufipogon ORUFI10G11860 I
OS10G0440100 Oryza sativa OS10G0440100 I
OSTLU_38105 Ostreococcus lucimarinus OSTLU_38105 I
PGSC0003DMG400008373 Solanum tuberosum PGSC0003DMG400008373 I
PGSC0003DMG401008915 Solanum tuberosum PGSC0003DMG401008915 I
Phyra95502 Phytophthora ramorum Phyra95502 I
Physo155631 Phytophthora sojae Physo155631 I
PITG_20195 Phytophthora infestans PITG_20195 I
POPTR_0006s12620 Populus trichocarpa POPTR_0006s12620 I
POPTR_0016s09640 Populus trichocarpa POPTR_0016s09640 I
PRUPE_ppa005481mg Prunus persica PRUPE_ppa005481mg I
PYU1_G008643 Pythium ultimum PYU1_G008643 I
Sb01g046810 Sorghum bicolor Sb01g046810 I
Sb03g031130 Sorghum bicolor Sb03g031130 I
Sb05g024630 Sorghum bicolor Sb05g024630 I
SELMODRAFT_129991 Selaginella moellendorffii SELMODRAFT_129991 I
SELMODRAFT_80923 Selaginella moellendorffii SELMODRAFT_80923 I
Si003799m.g Setaria italica Si003799m.g I
Si036124m.g Setaria italica Si036124m.g I
Solyc09g010670.2 Solanum lycopersicum Solyc09g010670.2 I
Solyc10g078430.1 Solanum lycopersicum Solyc10g078430.1 I
TCM_021956 Theobroma cacao TCM_021956 I
TCM_022240 Theobroma cacao TCM_022240 I
Thaps261479 Thalassiosira pseudonana Thaps261479 I
Traes_3AL_D7DE23839 Triticum aestivum Traes_3AL_D7DE23839 I
Traes_3DL_1E9DECCEA Triticum aestivum Traes_3DL_1E9DECCEA I
Traes_4AS_491EF4D7F Triticum aestivum Traes_4AS_491EF4D7F I
Traes_4BL_F7A02A7FD Triticum aestivum Traes_4BL_F7A02A7FD I
Traes_4DL_AE039EE10 Triticum aestivum Traes_4DL_AE039EE10 I
TriadG32839 Trichoplax adhaerens TriadG32839 I
TRIUR3_33333 Triticum urartu TRIUR3_33333 I
DPA Vitis vinifera VIT_08s0007g00170 I
VIT_08s0040g01330 Vitis vinifera VIT_08s0040g01330 I
TVAG_077130 Trichomonas vaginalis TVAG_077130 I
Ca_11214 Cicer arietinum Ca_11214 I
Ca_11215 Cicer arietinum Ca_11215 I
Cla001134 Citrullus lanatus Cla001134 I
Ogr00419 Ophisaurus gracilis Ogr00419 I
Pm019605 Prunus mume Pm019605 I
30078.m002288 Ricinus communis 30078.m002288 I
cassava23535.valid.m1 Manihot esculenta cassava23535.valid.m1 I
cassava31269.valid.m1 Manihot esculenta cassava31269.valid.m1 I
Cucsa.397930 Cucumis sativus Cucsa.397930 I
e_gw1.37.234.1 Physcomitrella patens e_gw1.37.234.1 I
e_gw1.74.211.1 Physcomitrella patens e_gw1.74.211.1 I
estExt_fgenesh5_synt.C_480006 Volvox carteri estExt_fgenesh5_synt.C_480006 I
estExt_fgeneshMC_pg.C_21302 Mucor circinelloides estExt_fgeneshMC_pg.C_21302 I
estExt_Genewise1.C_70441 Fragilariopsis cylindrus estExt_Genewise1.C_70441 I
estExt_gwp_gw1.C_2190085 Physcomitrella patens estExt_gwp_gw1.C_2190085 I
EuGene.0000040347 Micromonas pusilla EuGene.0000040347 I
fgenesh1_pm.chr_10_#_45 Ostreococcus RCC809 fgenesh1_pm.chr_10_#_45 I
fgeneshHS_pg.scaffold_39000098 Naegleria gruberi fgeneshHS_pg.scaffold_39000098 I
fgeneshPB_pg.16__301 Phycomyces blakesleeanus fgeneshPB_pg.16__301 I
gw1.2.505.1 Chlorella NC64A gw1.2.505.1 I
mgf001458m Mimulus guttatus mgf001458m I
mgf003834m Mimulus guttatus mgf003834m I
Aquca_030_00076 Aquilegia coerulea Aquca_030_00076 I
Aquca_062_00025 Aquilegia coerulea Aquca_062_00025 I
Bostr.2128s0112 Boechera stricta Bostr.2128s0112 I
Cagra.4354s0002 Capsella grandiflora Cagra.4354s0002 I
Carubv10001164m.g Capsella rubella Carubv10001164m.g I
Ciclev10012088m.g Citrus clementina Ciclev10012088m.g I
estExt_Genemark1.C_10169 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_10169 I
Eucgr.A01674 Eucalyptus grandis Eucgr.A01674 I
evm.TU.contig_32800 Carica papaya evm.TU.contig_32800 I
fgenesh2_pg.C_Chr_02000142 Micromonas sp RCC299 fgenesh2_pg.C_Chr_02000142 I
gene12582-v1.0-hybrid Fragaria vesca gene12582-v1.0-hybrid I
Gorai.002G247000 Gossypium raimondii Gorai.002G247000 I
Gorai.006G163100 Gossypium raimondii Gorai.006G163100 I
Lus10014423.g Linum usitatissimum Lus10014423.g I
Lus10022620.g Linum usitatissimum Lus10022620.g I
Lus10023926.g Linum usitatissimum Lus10023926.g I
MDP0000150153 Malus domestica MDP0000150153 I
MDP0000316055 Malus domestica MDP0000316055 I
orange1.1g018827m.g Citrus sinensis orange1.1g018827m.g I
Pavir.Ia04201 Panicum virgatum Pavir.Ia04201 I
Pavir.Ib00301 Panicum virgatum Pavir.Ib00301 I
Pavir.J03431 Panicum virgatum Pavir.J03431 I
SapurV1A.0584s0010 Salix purpurea SapurV1A.0584s0010 I
SapurV1A.1230s0050 Salix purpurea SapurV1A.1230s0050 I
Thhalv10014118m.g Eutrema salsugineum Thhalv10014118m.g I
Contig11543.0.0.g87 Oxytricha trifallax Contig11543.0.0.g87 I
Contig8006.0.0.g35 Oxytricha trifallax Contig8006.0.0.g35 I
LCUP009030 Lucilia cuprina LCUP009030 I
PK09434.1 Cannabis sativa PK09434.1 I
PK10877.1 Cannabis sativa PK10877.1 I
e_gw1.10.00.278.1 Ostreococcus tauri e_gw1.10.00.278.1 I
estExt_fgenesh1_pg.C_85250001 Phytophthora capsici estExt_fgenesh1_pg.C_85250001 I
estExt_fgeneshCV_pg.C_10474 Chlorella vulgaris estExt_fgeneshCV_pg.C_10474 I
LjSGA_030786.1 Lotus japonicus LjSGA_030786.1 I
PDK_20s1399251g001 Phoenix dactylifera PDK_20s1399251g001 I
PDK_20s1414621g001 Phoenix dactylifera PDK_20s1414621g001 I
MDOA008269 Musca domestica MDOA008269 I
augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0 I
augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0 I
DME_0000497501 Dracunculus medinensis DME_0000497501 I
L893_g26776 Steinernema glaseri L893_g26776 I
PTRK_0000381000 Parastrongyloides trichosuri PTRK_0000381000 I
RSKR_0000798800 Rhabditophanes kr3021 RSKR_0000798800 I
SPAL_0000874700 Strongyloides papillosus SPAL_0000874700 I
SSTP_0000696800 Strongyloides stercoralis SSTP_0000696800 I
SVE_0730800 Strongyloides venezuelensis SVE_0730800 I