Cmyd_10000498 (Chelonia mydas)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cmyd_10000498 T261253_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecp2
M00806_2.00 		Mus musculus
NNNNNHAHNN
NNDTDNNNNN		 PBM
Weirauch et al.(2013)
pTH3054 		0.901 0.901
MECP2
M09257_2.00 		Homo sapiens
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C 		0.901 0.901
Mecp2
M09259_2.00 		Mus musculus
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C 		0.901 0.901
MECP2
M11032_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_01 		0.901 0.901
MECP2
M11033_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_02 		0.901 0.901
MECP2
M11034_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4_01 		0.901 0.901
MECP2
M11035_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4 		0.901 0.901
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10000498 MBD 2 72

Links

Other MBD family TFs
Other Chelonia mydas TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mecp2 Mus musculus ENSMUSG00000031393 D 0.889
MECP2 Homo sapiens ENSG00000169057 D 0.889
ENSSHAG00000007851 Sarcophilus harrisii ENSSHAG00000007851 I 0.889
MECP2 Oryctolagus cuniculus ENSOCUG00000013147 I 0.889
MECP2 Otolemur garnettii ENSOGAG00000015115 I 0.889
ENSONIG00000000809 Oreochromis niloticus ENSONIG00000000809 I 0.803
mecp2 Oryzias latipes ENSORLG00000020117 I 0.775
ENSPANG00000011691 Papio anubis ENSPANG00000011691 I 0.889
MECP2 Procavia capensis ENSPCAG00000011826 I 0.831
ENSPFOG00000002307 Poecilia formosa ENSPFOG00000002307 I 0.778
ENSPPYG00000020866 Pongo abelii ENSPPYG00000020866 I 0.841
ENSPSIG00000002254 Pelodiscus sinensis ENSPSIG00000002254 I 0.889
MECP2 Pan troglodytes ENSPTRG00000022424 I 0.889
MECP2 Pteropus vampyrus ENSPVAG00000000472 I 0.886
Mecp2 Rattus norvegicus ENSRNOG00000056659 I 0.889
MECP2 Sorex araneus ENSSARG00000012925 I 0.889
MECP2 Ornithorhynchus anatinus ENSOANG00000011024 I 0.889
ENSSSCG00000012796 Sus scrofa ENSSSCG00000012796 I 0.889
ENSSTOG00000006094 Ictidomys tridecemlineatus ENSSTOG00000006094 I 0.889
mecp2 Tetraodon nigroviridis ENSTNIG00000005114 I 0.803
mecp2 Takifugu rubripes ENSTRUG00000006419 I 0.803
ENSTSYG00000007420 Tarsius syrichta ENSTSYG00000007420 I 0.889
MECP2 Tursiops truncatus ENSTTRG00000004653 I 0.889
ENSXMAG00000003522 Xiphophorus maculatus ENSXMAG00000003522 I 0.778
ENSP00000395535-D1 Bos grunniens ENSP00000395535-D1 I 0.889
ENSP00000395535 Macaca fascicularis ENSP00000395535 I 0.889
Myotis_brandtii_IRAK1_10010673 Myotis brandtii Myotis_brandtii_IRAK1_10010673 I 0.889
Ogr09995 Ophisaurus gracilis Ogr09995 I 0.889
Pvit_16673 Pogona vitticeps Pvit_16673 I 0.889
mecp2 Xenopus tropicalis XB-GENE-494740 I 0.857
mecp2.S Xenopus laevis XB-GENE-494744 I 0.857
MECP2 Felis catus ENSFCAG00000011389 I 0.889
ENSAMEG00000018448 Ailuropoda melanoleuca ENSAMEG00000018448 I 0.889
ENSAMXG00000017019 Astyanax mexicanus ENSAMXG00000017019 I 0.803
MECP2 Bos taurus ENSBTAG00000047855 I 0.889
MECP2 Canis familiaris ENSCAFG00000019440 I 0.889
MECP2 Callithrix jacchus ENSCJAG00000016796 I 0.889
MECP2 Cavia porcellus ENSCPOG00000012579 I 0.889
ENSCSAG00000006798 Chlorocebus sabaeus ENSCSAG00000006798 I 0.889
mecp2 Danio rerio ENSDARG00000014218 I 0.786
MECP2 Dasypus novemcinctus ENSDNOG00000013419 I 0.889
Mecp2 Dipodomys ordii ENSDORG00000014978 I 0.889
MECP2 Equus caballus ENSECAG00000018208 I 0.889
ENSEEUG00000003070 Erinaceus europaeus ENSEEUG00000003070 I 0.886
ENSEEUG00000015025 Erinaceus europaeus ENSEEUG00000015025 I 0.889
MECP2 Echinops telfairi ENSETEG00000009825 I 0.886
ENSOARG00000005806 Ovis aries ENSOARG00000005806 I 0.889
mecp2 Gasterosteus aculeatus ENSGACG00000000798 I 0.789
MECP2 Gorilla gorilla ENSGGOG00000000222 I 0.889
ENSLACG00000011281 Latimeria chalumnae ENSLACG00000011281 I 0.872
MECP2 Loxodonta africana ENSLAFG00000016292 I 0.841
ENSLOCG00000014725 Lepisosteus oculatus ENSLOCG00000014725 I 0.817
ENSMEUG00000002761 Macropus eugenii ENSMEUG00000002761 I 0.889
MECP2 Microcebus murinus ENSMICG00000005149 I 0.889
MECP2 Myotis lucifugus ENSMLUG00000014297 I 0.889
MECP2 Macaca mulatta ENSMMUG00000018704 I 0.889
MECP2 Monodelphis domestica ENSMODG00000011643 I 0.889
ENSMPUG00000009072 Mustela putorius furo ENSMPUG00000009072 I 0.889
ENSNLEG00000013783 Nomascus leucogenys ENSNLEG00000013783 I 0.817
MECP2 Anolis carolinensis ENSACAG00000012519 I 0.875