CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1317s0036
(
Capsella grandiflora
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Cagra.1317s0036
T261445_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1317s0036.1.p
MBD
23
95
VDTISFRGKILPGWTVVNRPPSSGNGNADTYFIEPGTGRQFSSLEAVQRHLTGEVSDRRVTRARAVSQDRTRV
Cagra.1317s0036.1.p
MBD
111
182
ASKGFRLPRGWSVEEVPRKNSYQIDKYYVERKTGKRFRSLISVERYLTESRNRADQKLMLLQCKRSHSKDFS
Cagra.1317s0036.1.p
MBD
173
257
CKRSHSKDFSLPDGWIVEEKPRKTSSHIDRSYIEPKTGNKFRSMAAVERYLLSVGNATLDSVSMLQSNQIALAVNRNDTRFLKEF
Links
Other
MBD
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLACG00000008064
Latimeria chalumnae
ENSLACG00000008064
N
ENSOANG00000002588
Ornithorhynchus anatinus
ENSOANG00000002588
N
ENSPSIG00000017935
Pelodiscus sinensis
ENSPSIG00000017935
N
Alligator_sinensis_CCG005660.1
Alligator sinensis
Alligator_sinensis_CCG005660.1
N
Cmyd_10018155
Chelonia mydas
Cmyd_10018155
N