mecp2.S (Xenopus laevis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 XB-GENE-494744 T261681_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecp2
M00806_2.00 		Mus musculus
NNNNNHAHNN
NNDTDNNNNN		 PBM
Weirauch et al.(2013)
pTH3054 		0.943 0.943
MECP2
M09257_2.00 		Homo sapiens
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C 		0.943 0.943
Mecp2
M09259_2.00 		Mus musculus
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C 		0.943 0.943
MECP2
M11032_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_01 		0.943 0.943
MECP2
M11033_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_02 		0.943 0.943
MECP2
M11034_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4_01 		0.943 0.943
MECP2
M11035_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4 		0.943 0.943
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAD02651 MBD 94 163
AAD03736 MBD 94 163

Links

Other MBD family TFs
Other Xenopus laevis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mecp2 Mus musculus ENSMUSG00000031393 D 0.917
MECP2 Homo sapiens ENSG00000169057 D 0.943
ENSSTOG00000006094 Ictidomys tridecemlineatus ENSSTOG00000006094 I 0.917
MECP2 Otolemur garnettii ENSOGAG00000015115 I 0.917
ENSONIG00000000809 Oreochromis niloticus ENSONIG00000000809 I 0.900
mecp2 Oryzias latipes ENSORLG00000020117 I 0.871
ENSPANG00000011691 Papio anubis ENSPANG00000011691 I 0.917
MECP2 Procavia capensis ENSPCAG00000011826 I 0.871
ENSPFOG00000002307 Poecilia formosa ENSPFOG00000002307 I 0.847
ENSPPYG00000020866 Pongo abelii ENSPPYG00000020866 I 0.843
ENSPSIG00000002254 Pelodiscus sinensis ENSPSIG00000002254 I 0.917
MECP2 Pan troglodytes ENSPTRG00000022424 I 0.917
Mecp2 Rattus norvegicus ENSRNOG00000056659 I 0.917
MECP2 Sorex araneus ENSSARG00000012925 I 0.917
ENSSHAG00000007851 Sarcophilus harrisii ENSSHAG00000007851 I 0.917
ENSSSCG00000012796 Sus scrofa ENSSSCG00000012796 I 0.917
ENSOARG00000005806 Ovis aries ENSOARG00000005806 I 0.917
mecp2 Tetraodon nigroviridis ENSTNIG00000005114 I 0.900
mecp2 Takifugu rubripes ENSTRUG00000006419 I 0.900
ENSTSYG00000007420 Tarsius syrichta ENSTSYG00000007420 I 0.944
MECP2 Tursiops truncatus ENSTTRG00000004653 I 0.917
ENSXMAG00000003522 Xiphophorus maculatus ENSXMAG00000003522 I 0.847
Cmyd_10000498 Chelonia mydas Cmyd_10000498 I 0.857
ENSP00000395535-D1 Bos grunniens ENSP00000395535-D1 I 0.917
ENSP00000395535 Macaca fascicularis ENSP00000395535 I 0.917
Myotis_brandtii_IRAK1_10010673 Myotis brandtii Myotis_brandtii_IRAK1_10010673 I 0.917
Ogr09995 Ophisaurus gracilis Ogr09995 I 0.917
Pvit_16673 Pogona vitticeps Pvit_16673 I 0.917
mecp2 Xenopus tropicalis XB-GENE-494740 I 1.000
mecp2 Gasterosteus aculeatus ENSGACG00000000798 I 0.873
ENSAMEG00000018448 Ailuropoda melanoleuca ENSAMEG00000018448 I 0.917
ENSAMXG00000017019 Astyanax mexicanus ENSAMXG00000017019 I 0.887
MECP2 Bos taurus ENSBTAG00000047855 I 0.917
MECP2 Canis familiaris ENSCAFG00000019440 I 0.917
MECP2 Callithrix jacchus ENSCJAG00000016796 I 0.917
MECP2 Cavia porcellus ENSCPOG00000012579 I 0.917
ENSCSAG00000006798 Chlorocebus sabaeus ENSCSAG00000006798 I 0.917
mecp2 Danio rerio ENSDARG00000014218 I 0.914
MECP2 Dasypus novemcinctus ENSDNOG00000013419 I 0.917
Mecp2 Dipodomys ordii ENSDORG00000014978 I 0.917
MECP2 Equus caballus ENSECAG00000018208 I 0.917
ENSEEUG00000015025 Erinaceus europaeus ENSEEUG00000015025 I 0.944
MECP2 Felis catus ENSFCAG00000011389 I 0.917
MECP2 Oryctolagus cuniculus ENSOCUG00000013147 I 0.917
MECP2 Gorilla gorilla ENSGGOG00000000222 I 0.917
ENSLACG00000011281 Latimeria chalumnae ENSLACG00000011281 I 0.917
MECP2 Loxodonta africana ENSLAFG00000016292 I 0.870
ENSLOCG00000014725 Lepisosteus oculatus ENSLOCG00000014725 I 0.886
ENSMEUG00000002761 Macropus eugenii ENSMEUG00000002761 I 0.917
MECP2 Microcebus murinus ENSMICG00000005149 I 0.917
MECP2 Myotis lucifugus ENSMLUG00000014297 I 0.917
MECP2 Macaca mulatta ENSMMUG00000018704 I 0.917
MECP2 Monodelphis domestica ENSMODG00000011643 I 0.917
ENSMPUG00000009072 Mustela putorius furo ENSMPUG00000009072 I 0.917
ENSNLEG00000013783 Nomascus leucogenys ENSNLEG00000013783 I 0.800
MECP2 Ornithorhynchus anatinus ENSOANG00000011024 I 0.917
MECP2 Anolis carolinensis ENSACAG00000012519 I 0.929