CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10024167m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10024167m.g
T265224_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10024167m
mTERF
94
303
LNLLTSNGFTDSQISSIITVYPRLLMLDAEKSLGPKLQFLQSRGASTSELTEILSKVPTILARKGEKTISIYYDFVKEIVEADKSSKYVKLCHSLPQGSKQENKLRNILALRELGVPQKLLFSLLVSDFRSISGKERFEESLKKVLDMGFDPTTSKFVQALHAVYQMSDKTIEEKVNIYKRLGFDVEDVWGMFKKFPQFLIYSEQKIVNK
Thhalv10024167m
mTERF
285
403
MFKKFPQFLIYSEQKIVNKVETFLGLGFSRDELAMMVKRFPQLLGCSSETLMKKTEFVVEKMNWSLKAVASNPAVFGYNFEKRIVPRCNVIKTLMSKGLMGSELPPMSLVLAITDEAFL
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_200374.1
Arabidopsis lyrata
scaffold_200374.1
N
0.707
Thhalv10019750m.g
Eutrema salsugineum
Thhalv10019750m.g
N
0.766
Thhalv10023445m.g
Eutrema salsugineum
Thhalv10023445m.g
N
0.737
Thhalv10023461m.g
Eutrema salsugineum
Thhalv10023461m.g
N
0.731
Thhalv10023467m.g
Eutrema salsugineum
Thhalv10023467m.g
N
0.704
Thhalv10023470m.g
Eutrema salsugineum
Thhalv10023470m.g
N
0.806
Thhalv10023472m.g
Eutrema salsugineum
Thhalv10023472m.g
N
0.743
Thhalv10024124m.g
Eutrema salsugineum
Thhalv10024124m.g
N
0.729
Thhalv10024133m.g
Eutrema salsugineum
Thhalv10024133m.g
N
0.700