TRP3 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT3G12560 T266437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.849 0.979
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.841 0.957
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.841 0.957
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.831 0.936
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G12560.1 Myb 509 559
AT3G12560.2 Myb 509 559

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TEQG_06359 Trichophyton equinum TEQG_06359 N 0.000
PABG_01084 Paracoccidioides brasiliensis PABG_01084 N 0.000
PFICI_12751 Pestalotiopsis fici PFICI_12751 N 0.000
PMAA_055610 Talaromyces marneffei PMAA_055610 N 0.000
PODANS_7_650 Podospora anserina PODANS_7_650 N 0.000
PTRG_10690 Pyrenophora triticirepentis PTRG_10690 N 0.000
PTT_05695 Pyrenophora teres PTT_05695 N 0.000
PVAR5_1962 Byssochlamys spectabilis PVAR5_1962 N 0.000
SETTUDRAFT_153515 Setosphaeria turcica SETTUDRAFT_153515 N 0.000
SMAC_02038 Sordaria macrospora SMAC_02038 N 0.000
PAAG_06800 Paracoccidioides sp lutzii PAAG_06800 N 0.000
TESG_07518 Trichophyton tonsurans TESG_07518 N 0.000
TRIATDRAFT_299214 Trichoderma atroviride TRIATDRAFT_299214 N 0.000
TRIREDRAFT_58853 Trichoderma reesei TRIREDRAFT_58853 N 0.000
TSTA_016750 Talaromyces stipitatus TSTA_016750 N 0.000
V499_03776 Pseudogymnoascus pannorum V499_03776 N 0.000
estExt_Genewise1.C_170090 Neurospora discreta estExt_Genewise1.C_170090 N 0.000
NCU05681 Neurospora crassa NCU05681 N 0.000
AB00152.1 Alternaria brassicicola AB00152.1 N 0.000
PMAA_055610 Penicillium marneffei PMAA_055610 N 0.000
CTHT_0072490 Chaetomium thermophilum CTHT_0072490 N 0.000
SNOG_09796 Stagonospora nodorum SNOG_09796 N 0.000
ARB_04480 Arthroderma benhamiae ARB_04480 N 0.000
BDDG_01953 Blastomyces dermatitidis BDDG_01953 N 0.000
CCM_09117 Cordyceps militaris CCM_09117 N 0.000
CH063_11689 Colletotrichum higginsianum CH063_11689 N 0.000
CHGG_05369 Chaetomium globosum CHGG_05369 N 0.000
Cob_05476 Colletotrichum orbiculare Cob_05476 N 0.000
COCC4DRAFT_156026 Bipolaris maydis COCC4DRAFT_156026 N 0.000
COCSADRAFT_213113 Bipolaris sorokiniana COCSADRAFT_213113 N 0.000
MCYG_05885 Microsporum canis MCYG_05885 N 0.000
GMDG_08515 Pseudogymnoascus destructans GMDG_08515 N 0.000
H101_07016 Trichophyton interdigitale H101_07016 N 0.000
HCBG_00501 Histoplasma capsulatum HCBG_00501 N 0.000
LEMA_P068960.1 Leptosphaeria maculans LEMA_P068960.1 N 0.000
MCYG_05885 Arthroderma otae MCYG_05885 N 0.000
MGYG_06086 Microsporum gypseum MGYG_06086 N 0.000
MYCTH_2061546 Myceliophthora thermophila MYCTH_2061546 N 0.000
NEUTE1DRAFT_80790 Neurospora tetrasperma NEUTE1DRAFT_80790 N 0.000