BGIOSGA018238 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA018238 T266862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.687 0.753
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.687 0.753
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.687 0.753
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.672 0.753
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.672 0.753
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.672 0.753
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.672 0.753
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.672 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA018238-PA Myb 20 66
BGIOSGA018238-PA Myb 72 117

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HSF5 Cavia porcellus ENSCPOG00000003431 I
ENSFALG00000014220 Ficedula albicollis ENSFALG00000014220 I
HSF5 Gallus gallus ENSGALG00000001031 I
HSF5 Gorilla gorilla ENSGGOG00000013788 I
ENSLACG00000015426 Latimeria chalumnae ENSLACG00000015426 I
ENSPFOG00000024243 Poecilia formosa ENSPFOG00000024243 I
ENSTGUG00000015457 Taeniopygia guttata ENSTGUG00000015457 I
ENSTNIG00000008554 Tetraodon nigroviridis ENSTNIG00000008554 I
ENSTRUG00000008763 Takifugu rubripes ENSTRUG00000008763 I
ENSTRUG00000016913 Takifugu rubripes ENSTRUG00000016913 I
ENSTRUG00000017318 Takifugu rubripes ENSTRUG00000017318 I
ENSTNIG00000003241 Tetraodon nigroviridis ENSTNIG00000003241 N
ENSTNIG00000016643 Tetraodon nigroviridis ENSTNIG00000016643 N
ENSTNIG00000019151 Tetraodon nigroviridis ENSTNIG00000019151 N
ENSTRUG00000000603 Takifugu rubripes ENSTRUG00000000603 N
ENSTRUG00000003823 Takifugu rubripes ENSTRUG00000003823 N