CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bra021033 *(Brassica rapa)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	Bra021033	T267934_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB39 M07106_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_col_a	0.832	0.914
MYB39 M07107_2.00	Arabidopsis thaliana	NYYYACCWAMYWHHHHHHHNH	DNDDDDDDDWRKTWGGTRRRN	Dap-seq OMalley et al.(2016) MYB39_colamp_a	0.832	0.914
PK28187.1 M01286_2.00	Cannabis sativa	TACCTACC	GGTAGGTA	PBM Lambert et al.(2019) pTH11305	0.748	0.763
AtMYB74 M07104_2.00	Arabidopsis thaliana	NYYYACCTAMYWHH	DDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB74_colamp_a	0.718	0.753
AtMYB74 M07105_2.00	Arabidopsis thaliana	BYHYACCTAMYHHH	DDDRKTAGGTRDRV	Dap-seq OMalley et al.(2016) MYB74_col	0.718	0.753
MYB49 M07140_2.00	Arabidopsis thaliana	HDBBYYACCWAMYWH	DWRKTWGGTRRVVHD	Dap-seq OMalley et al.(2016) MYB49_col_a	0.681	0.753
MYB49 M07141_2.00	Arabidopsis thaliana	NYYYACCTAMYWHN	NDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MYB49_colamp_a	0.681	0.753
MYB107 M07061_2.00	Arabidopsis thaliana	NDDWDBBYYACCWAMYHH	DDRKTWGGTRRVVHWHHN	Dap-seq OMalley et al.(2016) MYB107_col_a	0.679	0.753
MYB107 M07062_2.00	Arabidopsis thaliana	WNBYYYACCWAMYH	DRKTWGGTRRRVNW	Dap-seq OMalley et al.(2016) MYB107_colamp_a	0.679	0.753
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bra021033.1-P	Myb	15	62	KGPWMPEEDDKLRAYINKKGYGNWRSLPKLAGLNRCGKSCRLRWMNYL
Bra021033.1-P	Myb	68	113	RGEFSDEEESNIVRLHALLGNKWSKIASHLPGRTDNEIKNYWNTHM

Links
Other Myb/SANT family TFs
Other *Brassica rapa* TFs

337 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action