Bra038729 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra038729 T268133_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.849 0.979
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.841 0.957
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.841 0.957
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.831 0.936
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra038729.1-P Myb 498 548

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOM040797 Anopheles coluzzii ACOM040797 N
RPRC008982 Rhodnius prolixus RPRC008982 N
SINV21728 Solenopsis invicta SINV21728 N
TC006481 Tribolium castaneum TC006481 N
YQE_12022 Dendroctonus ponderosae YQE_12022 N
Cflo_10152--XP_396406.3_APIME Camponotus floridanus Cflo_10152--XP_396406.3_APIME N
Hsal_08940--XP_396406.3_APIME Harpegnathos saltator Hsal_08940--XP_396406.3_APIME N
CLEC011477 Cimex lectularius CLEC011477 N
HHAL008062-PA Halyomorpha halys HHAL008062-PA N
LCUP011793 Lucilia cuprina LCUP011793 N
LDEC009669 Leptinotarsa decemlineata LDEC009669 N
AALB001249 Anopheles albimanus AALB001249 N
ACHR006752 Anopheles christyi ACHR006752 N
PHUM125110 Pediculus humanus PHUM125110 N
ACUA003717 Anopheles culicifacies ACUA003717 N
ADIR009746 Anopheles dirus ADIR009746 N
AFAF006351 Anopheles farauti AFAF006351 N
AFUN002671 Anopheles funestus AFUN002671 N
AMAM021359 Anopheles maculatus AMAM021359 N
AMEM013501 Anopheles merus AMEM013501 N
AMIN006550 Anopheles minimus AMIN006550 N
ASIS016478 Anopheles sinensis ASIS016478 N
ASTEI06719 Anopheles stephensi ASTEI06719 N
LLOJ008249 Lutzomyia longipalpis LLOJ008249 N
MDOA009101 Musca domestica MDOA009101 N
PPAI000658 Phlebotomus papatasi PPAI000658 N
GD24896 Drosophila simulans FBgn0196212 N
AAEL013882 Aedes aegypti AAEL013882 N
ACEP27450 Atta cephalotes ACEP27450 N
ACYPI51366 Acyrthosiphon pisum ACYPI51366 N
AGAP010355 Anopheles gambiae AGAP010355 N
BGIBMGA008943 Bombyx mori BGIBMGA008943 N
CPIJ006499 Culex quinquefasciatus CPIJ006499 N
DAPPUDRAFT_314624 Daphnia pulex DAPPUDRAFT_314624 N
GF11509 Drosophila ananassae FBgn0088549 N
GG19859 Drosophila erecta FBgn0112060 N
GH23133 Drosophila grimshawi FBgn0130590 N
GI18474 Drosophila mojavensis FBgn0141213 N
GM11763 Drosophila sechellia FBgn0166706 N
CpipJ_CPIJ006499 Culex pipiens CpipJ_CPIJ006499 N
GJ21336 Drosophila virilis FBgn0208466 N
GK21725 Drosophila willistoni FBgn0223710 N
GE11385 Drosophila yakuba FBgn0229197 N
GA30490 Drosophila pseudoobscura FBgn0265027 N
lov Drosophila melanogaster FBgn0266129 N
GB48690 Apis mellifera GB48690 N
KGM_02106 Danaus plexippus KGM_02106 N
L798_10941 Zootermopsis nevadensis L798_10941 N
MCINX004651 Melitaea cinxia MCINX004651 N
MESCA004127 Megaselia scalaris MESCA004127 N
NV13136 Nasonia vitripennis NV13136 N