cdc5l (Tetraodon nigroviridis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ENSTNIG00000009853 T270110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.888 0.978
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.807 0.859
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.807 0.859
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000012742 Myb 8 54
ENSTNIP00000012742 Myb 60 104

Links

Other Myb/SANT family TFs
Other Tetraodon nigroviridis TFs

570 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTT_10593 Pyrenophora teres PTT_10593 N 0.000
estExt_Genewise1Plus.C_30684 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_30684 N 0.000
Z518_04505 Rhinocladiella mackenziei Z518_04505 N 0.000
Z517_07750 Fonsecaea pedrosoi Z517_07750 N 0.000
W97_03506 Coniosporium apollinis W97_03506 N 0.000
UCRNP2_4518 Neofusicoccum parvum UCRNP2_4518 N 0.000
SNOG_04741 Phaeosphaeria nodorum SNOG_04741 N 0.000
SETTUDRAFT_106188 Setosphaeria turcica SETTUDRAFT_106188 N 0.000
SBOR_0727 Sclerotinia borealis SBOR_0727 N 0.000
PV11_07979 Exophiala sideris PV11_07979 N 0.000
PV09_01633 Verruconis gallopava PV09_01633 N 0.000
PV08_05573 Exophiala spinifera PV08_05573 N 0.000
PV07_02098 Cladophialophora immunda PV07_02098 N 0.000
PV05_11914 Exophiala xenobiotica PV05_11914 N 0.000
PV04_01162 Capronia semiimmersa PV04_01162 N 0.000
SNOG_04741 Stagonospora nodorum SNOG_04741 N 0.000
PTRG_07876 Pyrenophora triticirepentis PTRG_07876 N 0.000
OIDMADRAFT_179337 Oidiodendron maius OIDMADRAFT_179337 N 0.000
MPH_00536 Macrophomina phaseolina MPH_00536 N 0.000
LEMA_P026340.1 Leptosphaeria maculans LEMA_P026340.1 N 0.000
GMDG_00068 Pseudogymnoascus destructans GMDG_00068 N 0.000
COCVIDRAFT_94626 Bipolaris victoriae COCVIDRAFT_94626 N 0.000
COCSADRAFT_339916 Bipolaris sorokiniana COCSADRAFT_339916 N 0.000
COCMIDRAFT_89586 Bipolaris oryzae COCMIDRAFT_89586 N 0.000
COCCADRAFT_24165 Bipolaris zeicola COCCADRAFT_24165 N 0.000
COCC4DRAFT_190319 Bipolaris maydis COCC4DRAFT_190319 N 0.000
Bcin01g06570 Botrytis cinerea Bcin01g06570 N 0.000
A1O5_06590 Cladophialophora psammophila A1O5_06590 N 0.000
A1O3_03567 Capronia epimyces A1O3_03567 N 0.000
A1O1_05793 Capronia coronata A1O1_05793 N 0.000