estExt_fgenesh1_pg.C_190109 (Bigelowiella natans)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 estExt_fgenesh1_pg.C_190109 T270191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.743 0.783
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.743 0.783
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.743 0.783
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.743 0.761
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.743 0.761
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.743 0.761
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.733 0.739
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.733 0.739
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.733 0.739
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.694 0.739
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.671 0.717
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.671 0.717
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.671 0.717
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_87346 Myb 31 76

Links

Other Myb/SANT family TFs
Other Bigelowiella natans TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYT1L Macaca mulatta ENSMMUG00000009310 I
MYT1L Homo sapiens ENSG00000186487 I
ENSONIG00000001923 Oreochromis niloticus ENSONIG00000001923 N
L3MBTL1 Oryctolagus cuniculus ENSOCUG00000006662 N
L3MBTL1 Ochotona princeps ENSOPRG00000002367 N
ENSORLG00000003513 Oryzias latipes ENSORLG00000003513 N
ENSPANG00000026135 Papio anubis ENSPANG00000026135 N
L3MBTL1 Procavia capensis ENSPCAG00000013248 N
ENSPFOG00000022630 Poecilia formosa ENSPFOG00000022630 N
ENSPSIG00000016444 Pelodiscus sinensis ENSPSIG00000016444 N
L3MBTL1 Pan troglodytes ENSPTRG00000013507 N
L3MBTL1 Pteropus vampyrus ENSPVAG00000015234 N
L3mbtl1 Rattus norvegicus ENSRNOG00000007044 N
ENSSSCG00000007365 Sus scrofa ENSSSCG00000007365 N
ENSSTOG00000011672 Ictidomys tridecemlineatus ENSSTOG00000011672 N
ENSTNIG00000012014 Tetraodon nigroviridis ENSTNIG00000012014 N
ENSTSYG00000014180 Tarsius syrichta ENSTSYG00000014180 N
L3MBTL1 Tursiops truncatus ENSTTRG00000012844 N
ENSXMAG00000019188 Xiphophorus maculatus ENSXMAG00000019188 N
ENSP00000362227 Macaca fascicularis ENSP00000362227 N
Myotis_brandtii_L3MBTL1_10025184 Myotis brandtii Myotis_brandtii_L3MBTL1_10025184 N
Ogr13959 Ophisaurus gracilis Ogr13959 N
estExt_fgenesh2_pg.C_5980016 Branchiostoma floridae estExt_fgenesh2_pg.C_5980016 N
Ocbimv22028662m.g Octopus bimaculoides Ocbimv22028662m.g N
l3mbtl1 Xenopus tropicalis XB-GENE-949999 N
AMEM007577 Anopheles merus AMEM007577 N
SVUK_0001589601 Strongylus vulgaris SVUK_0001589601 N
TsM_000155300 Taenia solium TsM_000155300 N
L3MBTL1 Homo sapiens ENSG00000185513 N
ENSAMEG00000003728 Ailuropoda melanoleuca ENSAMEG00000003728 N
ENSAMXG00000008822 Astyanax mexicanus ENSAMXG00000008822 N
L3MBTL1 Canis familiaris ENSCAFG00000009291 N
L3MBTL1 Choloepus hoffmanni ENSCHOG00000005052 N
L3MBTL1 Callithrix jacchus ENSCJAG00000003964 N
MYT1L Callithrix jacchus ENSCJAG00000007286 N
ENSCSAG00000014035 Chlorocebus sabaeus ENSCSAG00000014035 N
l3mbtl1a Danio rerio ENSDARG00000014828 N
L3mbtl1 Dipodomys ordii ENSDORG00000002707 N
L3MBTL1 Equus caballus ENSECAG00000008175 N
L3MBTL1 Erinaceus europaeus ENSEEUG00000006232 N
ENSETEG00000013916 Echinops telfairi ENSETEG00000013916 N
L3MBTL1 Otolemur garnettii ENSOGAG00000014470 N
ENSGACG00000006074 Gasterosteus aculeatus ENSGACG00000006074 N
ENSGMOG00000006059 Gadus morhua ENSGMOG00000006059 N
L3MBTL1 Microcebus murinus ENSMICG00000015115 N
ENSMLUG00000016624 Myotis lucifugus ENSMLUG00000016624 N
L3MBTL1 Monodelphis domestica ENSMODG00000003647 N
ENSMPUG00000017691 Mustela putorius furo ENSMPUG00000017691 N
L3mbtl1 Mus musculus ENSMUSG00000035576 N
ENSNLEG00000006529 Nomascus leucogenys ENSNLEG00000006529 N
L3MBTL1 Ornithorhynchus anatinus ENSOANG00000014344 N
ENSOARG00000003176 Ovis aries ENSOARG00000003176 N
L3MBTL1 Anolis carolinensis ENSACAG00000002143 N