estExt_Genewise1.C_230192 (Bigelowiella natans)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 estExt_Genewise1.C_230192 T270201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.833 0.924
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.833 0.924
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.784 0.891
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_48204 Myb 7 53
JGI_V11_48204 Myb 59 103

Links

Other Myb/SANT family TFs
Other Bigelowiella natans TFs

538 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU03266 Neurospora crassa NCU03266 D
SMAC_02983 Sordaria macrospora SMAC_02983 I
MANI_109748 Metarhizium anisopliae MANI_109748 I
MBR_03692 Metarhizium brunneum MBR_03692 I
MGU_04884 Metarhizium guizhouense MGU_04884 I
NechaG98757 Fusarium solani NechaG98757 I
NEUTE1DRAFT_133183 Neurospora tetrasperma NEUTE1DRAFT_133183 I
PODANS_1_2230 Podospora anserina PODANS_1_2230 I
S40285_01877 Stachybotrys chlorohalonata S40285_01877 I
S40288_08800 Stachybotrys chartarum S40288_08800 I
MAM_06825 Metarhizium album MAM_06825 I
SPBR_06725 Sporothrix brasiliensis SPBR_06725 I
VDAG_03007 Verticillium dahliae VDAG_03007 I
VDBG_05845 Verticillium alfalfae VDBG_05845 I
X797_003774 Metarhizium robertsii X797_003774 I
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 I
estExt_fgenesh3_pm.C_70282 Neurospora discreta estExt_fgenesh3_pm.C_70282 I
fgenesh1_pm.C_scaffold_5000435 Cryphonectria parasitica fgenesh1_pm.C_scaffold_5000435 I
FFUJ_01281 Fusarium fujikuroi FFUJ_01281 I
BBA_00148 Beauveria bassiana BBA_00148 I
CCM_06184 Cordyceps militaris CCM_06184 I
CFIO01_01433 Colletotrichum fioriniae CFIO01_01433 I
CGGC5_5664 Colletotrichum gloeosporioides CGGC5_5664 I
CH063_05074 Colletotrichum higginsianum CH063_05074 I
Cob_03876 Colletotrichum orbiculare Cob_03876 I
CPUR_03335 Claviceps purpurea CPUR_03335 I
CSUB01_02498 Colletotrichum sublineola CSUB01_02498 I
VDBG_05845 Verticillium albo atrum VDBG_05845 I
FOXG_00297 Fusarium oxysporum FOXG_00297 I
FPSE_09056 Fusarium pseudograminearum FPSE_09056 I
FVEG_01221 Fusarium verticillioides FVEG_01221 I
GLRG_04370 Colletotrichum graminicola GLRG_04370 I
HMPREF1624_00506 Sporothrix schenckii HMPREF1624_00506 I
MAC_05257 Metarhizium acridum MAC_05257 I
MAJ_02218 Metarhizium majus MAJ_02218 I