fgenesh2_kg.3__2684__AT5G58850.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.3__2684__AT5G58850.1 T270773_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.672 0.753
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.672 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2684__AT5G58850.1 Myb 105 151
fgenesh2_kg.3__2684__AT5G58850.1 Myb 157 202

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CH063_00153 Colletotrichum higginsianum CH063_00153 N 0.000
PFICI_00554 Pestalotiopsis fici PFICI_00554 N 0.000