GRMZM2G181030 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G181030 T272124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.738 0.761
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.724 0.739
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.724 0.739
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.724 0.739
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.724 0.739
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.724 0.739
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.716 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.707 0.804
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.707 0.804
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.701 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.701 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.701 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.671 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.671 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G181030_P01 Myb 58 103

Links

Other Myb/SANT family TFs
Other Zea mays TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_043080 Aspergillus clavatus CADACLAG00004167 N 0.000
ATEG_03710 Aspergillus terreus CADATEAG00009650 N 0.000
NFIA_096350 Neosartorya fischeri CADNFIAG00009280 N 0.000
CCM_03473 Cordyceps militaris CCM_03473 N 0.000
COCC4DRAFT_84362 Bipolaris maydis COCC4DRAFT_84362 N 0.000
COCMIDRAFT_107095 Bipolaris oryzae COCMIDRAFT_107095 N 0.000
COCSADRAFT_178261 Bipolaris sorokiniana COCSADRAFT_178261 N 0.000
FFUJ_08022 Fusarium fujikuroi FFUJ_08022 N 0.000
FOXG_10665 Fusarium oxysporum FOXG_10665 N 0.000
MGYG_04676 Microsporum gypseum MGYG_04676 N 0.000
OIDMADRAFT_170239 Oidiodendron maius OIDMADRAFT_170239 N 0.000
OIDMADRAFT_180554 Oidiodendron maius OIDMADRAFT_180554 N 0.000