CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GSMUA_Achr11G01420_001 *(Musa acuminata)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GSMUA_Achr11G01420_001	T272273_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK08316.1 M02350_2.00	Cannabis sativa	NNNRWATCNN	NNGATWYNNN	PBM Weirauch et al.(2014) pTH9488	0.859	0.870
RVE1 M00879_2.00	Arabidopsis thaliana	AAATATCT	AGATATTT	PBM Franco-Zorrilla et al.(2014) RVE1	0.799	0.848
RVE1 M07128_2.00	Arabidopsis thaliana	NNNWAAATATCTNN	NNAGATATTTWNNN	Dap-seq OMalley et al.(2016) RVE1_col_a	0.799	0.848
RVE1 M07129_2.00	Arabidopsis thaliana	NNWAATATCW	WGATATTWNN	Dap-seq OMalley et al.(2016) RVE1_colamp_a	0.799	0.848
LHY M06997_2.00	Arabidopsis thaliana	NWAAATATCT	AGATATTTWN	Dap-seq OMalley et al.(2016) LHY1_col_a	0.798	0.870
LHY M06998_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LHY1_colamp_a	0.798	0.870
RVE7 M01069_2.00	Arabidopsis thaliana	NDHRWATCNN	NNGATWYDHN	PBM Sullivan et al.(2014) pTH7081	0.795	0.826
RVE7 M02286_2.00	Arabidopsis thaliana	NDARTATCH	DGATAYTHN	PBM Weirauch et al.(2014) pTH7277	0.795	0.826
RVE7L M07071_2.00	Arabidopsis thaliana	NNNNWAAATATCWNN	NNWGATATTTWNNNN	Dap-seq OMalley et al.(2016) AT3G10113_col_a	0.795	0.826
RVE7 M07008_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) EPR1_colamp_a	0.795	0.826
RVE7 M07009_2.00	Arabidopsis thaliana	NWAAATATCTHN	NDAGATATTTWN	Dap-seq OMalley et al.(2016) EPR1_col	0.795	0.826
OS08G0157600 M02330_2.00	Oryza sativa	DNRTATCHN	NDGATAYNH	PBM Weirauch et al.(2014) pTH7793	0.788	0.848
CCA1 M00875_2.00	Arabidopsis thaliana	NDNRWATCN	NGATWYNHN	PBM Franco-Zorrilla et al.(2014) CCA1	0.743	0.804
CCA1 M11039_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CCA1_Q5	0.743	0.804
RVE6 M01081_2.00	Arabidopsis thaliana	AATATCTD	HAGATATT	PBM Sullivan et al.(2014) pTH7151	0.699	0.696
RVE6 M07138_2.00	Arabidopsis thaliana	NNAAAATATCT	AGATATTTTNN	Dap-seq OMalley et al.(2016) At5g52660_col_a	0.699	0.696
RVE6 M07139_2.00	Arabidopsis thaliana	NNNWAAATATCT	AGATATTTWNNN	Dap-seq OMalley et al.(2016) At5g52660_colamp_a	0.699	0.696
RVE5 M01079_2.00	Arabidopsis thaliana	NWAATATCHN	NDGATATTWN	PBM Sullivan et al.(2014) pTH7138	0.696	0.652
RVE5 M07100_2.00	Arabidopsis thaliana	NNAAAATATCT	AGATATTTTNN	Dap-seq OMalley et al.(2016) At4g01280_col_a	0.696	0.652
RVE5 M07101_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At4g01280_colamp_a	0.696	0.652
RVE8 M01074_2.00	Arabidopsis thaliana	NNNRWATCNN	NNGATWYNNN	PBM Sullivan et al.(2014) pTH7136	0.689	0.696
RVE8 M07069_2.00	Arabidopsis thaliana	NHNWAAATATCT	AGATATTTWNDN	Dap-seq OMalley et al.(2016) At3g09600_col_a	0.689	0.696
RVE8 M07070_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At3g09600_colamp_a	0.689	0.696
PK02532.1 M02347_2.00	Cannabis sativa	WAATATCTN	NAGATATTW	PBM Weirauch et al.(2014) pTH9579	0.689	0.674
RVE4 M07117_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LCL1_colamp_a	0.689	0.674
RVE4 M07118_2.00	Arabidopsis thaliana	NAAAATATCT	AGATATTTTN	Dap-seq OMalley et al.(2016) LCL1_col	0.689	0.674
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GSMUA_Achr11P01420_001	Myb	71	116	REKWTEEEHSKFLEALQLYGRAWRRIEEHIGTKTAVQIRSHAQKFF

Links
Other Myb/SANT family TFs
Other *Musa acuminata* TFs

459 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
TERF1	Sus scrofa	ENSSSCG00000006184	N	0.000
ENSOGAG00000005848	Otolemur garnettii	ENSOGAG00000005848	N	0.000
ENSOGAG00000033284	Otolemur garnettii	ENSOGAG00000033284	N	0.000
ENSPANG00000025943	Papio anubis	ENSPANG00000025943	N	0.000
TERF1	Procavia capensis	ENSPCAG00000007698	N	0.000
ENSPPYG00000003709	Pongo abelii	ENSPPYG00000003709	N	0.000
ENSPPYG00000018261	Pongo abelii	ENSPPYG00000018261	N	0.000
ENSPPYG00000018669	Pongo abelii	ENSPPYG00000018669	N	0.000
TERF1	Pan troglodytes	ENSPTRG00000022919	N	0.000
TERF1	Pteropus vampyrus	ENSPVAG00000003792	N	0.000
Terf1	Rattus norvegicus	ENSRNOG00000007291	N	0.000
ENSOCUG00000002793	Oryctolagus cuniculus	ENSOCUG00000002793	N	0.000
ENSSTOG00000004560	Ictidomys tridecemlineatus	ENSSTOG00000004560	N	0.000
ENSSTOG00000025051	Ictidomys tridecemlineatus	ENSSTOG00000025051	N	0.000
ENSSTOG00000026069	Ictidomys tridecemlineatus	ENSSTOG00000026069	N	0.000
TERF1	Tupaia belangeri	ENSTBEG00000011779	N	0.000
ENSTSYG00000006478	Tarsius syrichta	ENSTSYG00000006478	N	0.000
TERF1	Tursiops truncatus	ENSTTRG00000003745	N	0.000
TERF1	Vicugna pacos	ENSVPAG00000000533	N	0.000
ENSBTAP00000044076-D1	Bos grunniens	ENSBTAP00000044076-D1	N	0.000
ENSP00000276603	Macaca fascicularis	ENSP00000276603	N	0.000
Myotis_brandtii_TERF1_10031667	Myotis brandtii	Myotis_brandtii_TERF1_10031667	N	0.000
TERF1	Felis catus	ENSFCAG00000026385	N	0.000
TERF1	Bos taurus	ENSBTAG00000032982	N	0.000
TERF1	Canis familiaris	ENSCAFG00000007975	N	0.000
TERF1	Choloepus hoffmanni	ENSCHOG00000002407	N	0.000
TERF1	Callithrix jacchus	ENSCJAG00000007714	N	0.000
TERF1	Cavia porcellus	ENSCPOG00000009638	N	0.000
ENSCSAG00000013598	Chlorocebus sabaeus	ENSCSAG00000013598	N	0.000
ENSDNOG00000011332	Dasypus novemcinctus	ENSDNOG00000011332	N	0.000
Terf1	Dipodomys ordii	ENSDORG00000003657	N	0.000
TERF1	Equus caballus	ENSECAG00000011894	N	0.000
TERF1	Erinaceus europaeus	ENSEEUG00000008963	N	0.000
ENSAMEG00000006001	Ailuropoda melanoleuca	ENSAMEG00000006001	N	0.000
TERF1	Homo sapiens	ENSG00000147601	N	0.000
ENSGGOG00000025393	Gorilla gorilla	ENSGGOG00000025393	N	0.000
TERF1	Loxodonta africana	ENSLAFG00000004308	N	0.000
TERF1	Myotis lucifugus	ENSMLUG00000012171	N	0.000
TERF1	Macaca mulatta	ENSMMUG00000023208	N	0.000
ENSMODG00000025642	Monodelphis domestica	ENSMODG00000025642	N	0.000
ENSMPUG00000010251	Mustela putorius furo	ENSMPUG00000010251	N	0.000
Terf1	Mus musculus	ENSMUSG00000025925	N	0.000
TERF1	Ornithorhynchus anatinus	ENSOANG00000001722	N	0.000
ENSOARG00000005381	Ovis aries	ENSOARG00000005381	N	0.000

GSMUA_Achr11G01420_001 (Musa acuminata) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

459 Related TFs

GSMUA_Achr11G01420_001 **(Musa acuminata)
Myb/SANT**