CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-pir_contig_1091-fgenesh-gene-0.2
(
Pythium irregulare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
maker-pir_contig_1091-fgenesh-gene-0.2
T274102_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000022945
Myb
17
63
RGVWSQDEHDLFLEALQLHPQGPWKVVAEHIGTRSVRQAQTHAQKYH
Links
Other
Myb/SANT
family TFs
Other
Pythium irregulare
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_16836
Phytophthora parasitica
F443_16836
N
0.667
fgenesh_scip_prom.28083.2088
Phytophthora lateralis
fgenesh_scip_prom.28083.2088
N
0.676
maker-par_contig_5863-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_5863-snap-gene-0.1
N
0.668
maker-par_contig_6289-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_6289-fgenesh-gene-0.0
N
0.662
maker-pir_contig_2908-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_2908-fgenesh-gene-0.0
N
0.706
maker-piw_contig_6027-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_6027-fgenesh-gene-0.0
N
0.711
maker-piw_contig_643-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_643-fgenesh-gene-0.2
N
0.770
Phyra84533
Phytophthora ramorum
Phyra84533
N
0.666
Physo142761
Phytophthora sojae
Physo142761
N
0.666
PITG_21561
Phytophthora infestans
PITG_21561
N
0.676
PYU1_G006427
Pythium ultimum
PYU1_G006427
N
0.721
PYU1_G006442
Pythium ultimum
PYU1_G006442
N
0.847
PYU1_G006443
Pythium ultimum
PYU1_G006443
N
0.880
fgenesh1_pm.C_scaffold_9000158
Phytophthora capsici
fgenesh1_pm.C_scaffold_9000158
N
0.666