CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_78-snap-gene-0.19
(
Pythium irregulare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
maker-pir_contig_78-snap-gene-0.19
T274162_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra73031
M02332_2.00
Phytophthora ramorum
NDRKTCAGTN
NACTGAMYHN
PBM
Weirauch et al.(2014)
pTH7816
0.835
0.935
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000015110
Myb
502
548
PRRWTKEEDEALRQAVESHREKNWKAIAAEVPGRNHTQCLQRWTKVL
EPrPI00000015110
Myb
554
599
KGHWSPQEDDLLRRLVASEQKNWGEVAAKIPGRTSKQCRERWHNHL
EPrPI00000015110
Myb
605
649
RGAYTPEEDRIILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKSH
Links
Other
Myb/SANT
family TFs
Other
Pythium irregulare
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra73031
Phytophthora ramorum
Phyra73031
D
0.835
maker-par_contig_505-fgenesh-gene-0.4
Pythium arrhenomanes
maker-par_contig_505-fgenesh-gene-0.4
I
0.777
estExt_Genewise1Plus.C_40041
Phytophthora capsici
estExt_Genewise1Plus.C_40041
I
0.832
estExt_Genewise1.C_230193
Phytophthora capsici
estExt_Genewise1.C_230193
I
0.775
e_gw1.13.473.1
Phytophthora capsici
e_gw1.13.473.1
I
0.698
snap_masked-pve_contig_1-abinit-gene-1.66
Pythium vexans
snap_masked-pve_contig_1-abinit-gene-1.66
I
0.859
snap_masked-pir_contig_160-abinit-gene-0.52
Pythium irregulare
snap_masked-pir_contig_160-abinit-gene-0.52
I
0.698
PYU1_G013892
Pythium ultimum
PYU1_G013892
I
0.698
PYU1_G009485
Pythium ultimum
PYU1_G009485
I
0.909
PITG_16114
Phytophthora infestans
PITG_16114
I
0.838
PITG_13133
Phytophthora infestans
PITG_13133
I
0.780
Physo128670
Phytophthora sojae
Physo128670
I
0.858
Physo127870
Phytophthora sojae
Physo127870
I
0.774
Phyra71435
Phytophthora ramorum
Phyra71435
I
0.775
maker-pve_contig_111-snap-gene-0.29
Pythium vexans
maker-pve_contig_111-snap-gene-0.29
I
0.688
SPRG_12165
Saprolegnia parasitica
SPRG_12165
I
0.775
maker-pag1_scaffold_987-fgenesh-gene-0.0
Pythium aphanidermatum
maker-pag1_scaffold_987-fgenesh-gene-0.0
I
0.780
maker-pag1_scaffold_208-fgenesh-gene-0.6
Pythium aphanidermatum
maker-pag1_scaffold_208-fgenesh-gene-0.6
I
0.779
HpaG813239
Hyaloperonospora arabidopsidis
HpaG813239
I
0.766
HpaG806491
Hyaloperonospora arabidopsidis
HpaG806491
I
0.852
fgenesh_scip_prom.28083.4781
Phytophthora lateralis
fgenesh_scip_prom.28083.4781
I
0.835
fgenesh_scip_prom.28083.3149
Phytophthora lateralis
fgenesh_scip_prom.28083.3149
I
0.775
fgenesh-piw_contig_33-abinit-gene-0.101
Pythium iwayamai
fgenesh-piw_contig_33-abinit-gene-0.101
I
0.698
F443_18023
Phytophthora parasitica
F443_18023
I
0.698
F443_09333
Phytophthora parasitica
F443_09333
I
0.774
F443_05404
Phytophthora parasitica
F443_05404
I
0.832
ALNC14_087270
Albugo laibachii
ALNC14_087270
I
0.717
ALNC14_009780
Albugo laibachii
ALNC14_009780
I
0.848
maker-par_contig_481-snap-gene-0.6
Pythium arrhenomanes
maker-par_contig_481-snap-gene-0.6
N
0.667