CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MLOC_57410 *(Hordeum vulgare)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	MLOC_57410	T274520_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TRP5 M01266_2.00	Arabidopsis thaliana	NHWAAACCYH	DRGGTTTWDN	PBM Lambert et al.(2019) pTH9963	0.789	0.872
PK21687.1 M01282_2.00	Cannabis sativa	HWAAACCYH	DRGGTTTWD	PBM Lambert et al.(2019) pTH11299	0.789	0.872
TRP1 M07148_2.00	Arabidopsis thaliana	AAACCCTAAACCCTAAACCCTAA	TTAGGGTTTAGGGTTTAGGGTTT	Dap-seq OMalley et al.(2016) TRP1_col	0.789	0.872
TRP2 M07092_2.00	Arabidopsis thaliana	AAACCCTAAACCCTAAACCC	GGGTTTAGGGTTTAGGGTTT	Dap-seq OMalley et al.(2016) TRP2_col_a	0.789	0.872
TRP2 M07093_2.00	Arabidopsis thaliana	AAACCCTAAACCCTAAACCCT	AGGGTTTAGGGTTTAGGGTTT	Dap-seq OMalley et al.(2016) TRP2_colamp_a	0.789	0.872
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
MLOC_57410.1	Myb	557	607	RRPFSLPEVEALVEAVEQLGTGRWRDVKMLAFDNTDHRTYVDLKDKWKTLV
MLOC_57410.2	Myb	536	586	RRPFSLPEVEALVEAVEQLGTGRWRDVKMLAFDNTDHRTYVDLKDKWKTLV
MLOC_57410.3	Myb	557	607	RRPFSLPEVEALVEAVEQLGTGRWRDVKMLAFDNTDHRTYVDLKDKWKTLV
MLOC_57410.4	Myb	536	586	RRPFSLPEVEALVEAVEQLGTGRWRDVKMLAFDNTDHRTYVDLKDKWKTLV
MLOC_57410.5	Myb	557	607	RRPFSLPEVEALVEAVEQLGTGRWRDVKMLAFDNTDHRTYVDLKDKWKTLV

Links
Other Myb/SANT family TFs
Other *Hordeum vulgare* TFs