MLOC_59912 (Hordeum vulgare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MLOC_59912 T274531_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.730 0.717
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.730 0.717
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.722 0.717
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.715 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.715 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_59912.1 Myb 80 125

Links

Other Myb/SANT family TFs
Other Hordeum vulgare TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_17752 Wuchereria bancrofti WUBG_17752 N 0.000
LOAG_07717 Loa loa LOAG_07717 N 0.000
WBGene00248188 Onchocerca volvulus WBGene00248188 N 0.000
BTMF_0000996001 Brugia timori BTMF_0000996001 N 0.000
EEL_0000696401 Elaeophora elaphi EEL_0000696401 N 0.000
nAv.1.0.1.g03078 Acanthocheilonema viteae nAv.1.0.1.g03078 N 0.000
nDi.2.2.2.g06277 Dirofilaria immitis nDi.2.2.2.g06277 N 0.000
nLs.2.1.2.g09887 Litomosoides sigmodontis nLs.2.1.2.g09887 N 0.000