OB04G29880 (Oryza brachyantha)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OB04G29880 T275283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.805 0.804
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.805 0.804
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.805 0.804
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.805 0.804
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.805 0.804
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.800 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.788 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.788 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.778 0.804
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.758 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.758 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.758 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.732 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.732 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB04G29880.1 Myb 59 104

Links

Other Myb/SANT family TFs
Other Oryza brachyantha TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSSSCG00000007365 Sus scrofa ENSSSCG00000007365 N
L3MBTL1 Otolemur garnettii ENSOGAG00000014470 N
ENSONIG00000001923 Oreochromis niloticus ENSONIG00000001923 N
L3MBTL1 Ochotona princeps ENSOPRG00000002367 N
ENSORLG00000003513 Oryzias latipes ENSORLG00000003513 N
ENSPANG00000026135 Papio anubis ENSPANG00000026135 N
L3MBTL1 Procavia capensis ENSPCAG00000013248 N
ENSPFOG00000022630 Poecilia formosa ENSPFOG00000022630 N
ENSPSIG00000016444 Pelodiscus sinensis ENSPSIG00000016444 N
L3MBTL1 Pan troglodytes ENSPTRG00000013507 N
L3MBTL1 Pteropus vampyrus ENSPVAG00000015234 N
L3mbtl1 Rattus norvegicus ENSRNOG00000007044 N
L3MBTL1 Oryctolagus cuniculus ENSOCUG00000006662 N
ENSSTOG00000011672 Ictidomys tridecemlineatus ENSSTOG00000011672 N
ENSTNIG00000012014 Tetraodon nigroviridis ENSTNIG00000012014 N
ENSTSYG00000014180 Tarsius syrichta ENSTSYG00000014180 N
L3MBTL1 Tursiops truncatus ENSTTRG00000012844 N
ENSXMAG00000019188 Xiphophorus maculatus ENSXMAG00000019188 N
ENSP00000362227 Macaca fascicularis ENSP00000362227 N
Myotis_brandtii_L3MBTL1_10025184 Myotis brandtii Myotis_brandtii_L3MBTL1_10025184 N
Ogr13959 Ophisaurus gracilis Ogr13959 N
estExt_fgenesh2_pg.C_5980016 Branchiostoma floridae estExt_fgenesh2_pg.C_5980016 N
Ocbimv22028662m.g Octopus bimaculoides Ocbimv22028662m.g N
l3mbtl1 Xenopus tropicalis XB-GENE-949999 N
L3MBTL1 Homo sapiens ENSG00000185513 N
ENSAMEG00000003728 Ailuropoda melanoleuca ENSAMEG00000003728 N
ENSAMXG00000008822 Astyanax mexicanus ENSAMXG00000008822 N
L3MBTL1 Canis familiaris ENSCAFG00000009291 N
L3MBTL1 Choloepus hoffmanni ENSCHOG00000005052 N
L3MBTL1 Callithrix jacchus ENSCJAG00000003964 N
ENSCSAG00000014035 Chlorocebus sabaeus ENSCSAG00000014035 N
l3mbtl1a Danio rerio ENSDARG00000014828 N
L3mbtl1 Dipodomys ordii ENSDORG00000002707 N
L3MBTL1 Equus caballus ENSECAG00000008175 N
L3MBTL1 Erinaceus europaeus ENSEEUG00000006232 N
ENSETEG00000013916 Echinops telfairi ENSETEG00000013916 N
L3MBTL1 Anolis carolinensis ENSACAG00000002143 N
ENSGACG00000006074 Gasterosteus aculeatus ENSGACG00000006074 N
L3MBTL1 Gorilla gorilla ENSGGOG00000034980 N
ENSGMOG00000006059 Gadus morhua ENSGMOG00000006059 N
L3MBTL1 Microcebus murinus ENSMICG00000015115 N
ENSMLUG00000016624 Myotis lucifugus ENSMLUG00000016624 N
L3MBTL1 Monodelphis domestica ENSMODG00000003647 N
ENSMPUG00000017691 Mustela putorius furo ENSMPUG00000017691 N
L3mbtl1 Mus musculus ENSMUSG00000035576 N
ENSNLEG00000006529 Nomascus leucogenys ENSNLEG00000006529 N
L3MBTL1 Ornithorhynchus anatinus ENSOANG00000014344 N
ENSOARG00000003176 Ovis aries ENSOARG00000003176 N