OBART01G03720 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART01G03720 T275419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.716 0.739
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.716 0.739
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.708 0.739
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.667 0.717
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.667 0.717
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.667 0.717
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.667 0.696
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.667 0.696
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.667 0.696
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.662 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.662 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART01G03720.1 Myb 32 77

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017962 Oryza indica BGIOSGA017962 N 0.000
BRADI4G42180 Brachypodium distachyon BRADI4G42180 N 0.000
GRMZM2G172264 Zea mays GRMZM2G172264 N 0.000
OGLUM05G19250 Oryza glumaepatula OGLUM05G19250 N 0.000
OLONG_005650 Oryza longistaminata OLONG_005650 N 0.000
OMERI05G15710 Oryza meridionalis OMERI05G15710 N 0.000
ONIVA05G19100 Oryza nivara ONIVA05G19100 N 0.000
ORGLA05G0157800 Oryza glaberrima ORGLA05G0157800 N 0.000
ORUFI05G19350 Oryza rufipogon ORUFI05G19350 N 0.000
OS05G0442700 Oryza sativa OS05G0442700 N 0.000
Aquca_072_00079 Aquilegia coerulea Aquca_072_00079 N 0.000