OBART01G26850 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART01G26850 T275439_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.727 0.763
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.727 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART01G26850.1 Myb 14 62
OBART01G26850.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

471 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb04g036640 Sorghum bicolor Sb04g036640 I
Si017967m.g Setaria italica Si017967m.g I
Pavir.J34679 Panicum virgatum Pavir.J34679 I
Traes_6BL_D00F04562 Triticum aestivum Traes_6BL_D00F04562 I
GRMZM5G857701 Zea mays GRMZM5G857701 I
Pavir.Aa00144 Panicum virgatum Pavir.Aa00144 I
cassava41082.m1 Manihot esculenta cassava41082.m1 N
Aquca_017_00744 Aquilegia coerulea Aquca_017_00744 N
Pm020580 Prunus mume Pm020580 N
Ca_07743 Cicer arietinum Ca_07743 N
TRIUR3_33179 Triticum urartu TRIUR3_33179 N
TRIUR3_32754 Triticum urartu TRIUR3_32754 N
Traes_6DL_8A1342D56 Triticum aestivum Traes_6DL_8A1342D56 N
Traes_6DL_1ABE78799 Triticum aestivum Traes_6DL_1ABE78799 N
Traes_6BL_99F790D57 Triticum aestivum Traes_6BL_99F790D57 N
Traes_6AL_B92597EA9 Triticum aestivum Traes_6AL_B92597EA9 N
Traes_2DL_E2E912AFF Triticum aestivum Traes_2DL_E2E912AFF N
TCM_003998 Theobroma cacao TCM_003998 N
Solyc09g025310.2 Solanum lycopersicum Solyc09g025310.2 N
Solyc06g008360.2 Solanum lycopersicum Solyc06g008360.2 N
Si036835m.g Setaria italica Si036835m.g N
Si018001m.g Setaria italica Si018001m.g N
Si010799m.g Setaria italica Si010799m.g N
Sb04g026440 Sorghum bicolor Sb04g026440 N
Pavir.Ab02337 Panicum virgatum Pavir.Ab02337 N
PDK_20s1648061g001 Phoenix dactylifera PDK_20s1648061g001 N
PDK_20s1301681g003 Phoenix dactylifera PDK_20s1301681g003 N
PK19051.1 Cannabis sativa PK19051.1 N
SapurV1A.0233s0110 Salix purpurea SapurV1A.0233s0110 N
SapurV1A.0006s0680 Salix purpurea SapurV1A.0006s0680 N
Pavir.J11268 Panicum virgatum Pavir.J11268 N
Pavir.Ib03261 Panicum virgatum Pavir.Ib03261 N
Pavir.Gb00655 Panicum virgatum Pavir.Gb00655 N
Pavir.Ga01251 Panicum virgatum Pavir.Ga01251 N
mgf018312m Mimulus guttatus mgf018312m N
Pavir.Aa01668 Panicum virgatum Pavir.Aa01668 N
MDP0000697030 Malus domestica MDP0000697030 N
Gorai.007G147300 Gossypium raimondii Gorai.007G147300 N
Gorai.001G254300 Gossypium raimondii Gorai.001G254300 N
Gorai.001G178800 Gossypium raimondii Gorai.001G178800 N
gene08112-v1.0-hybrid Fragaria vesca gene08112-v1.0-hybrid N
Eucgr.K03256 Eucalyptus grandis Eucgr.K03256 N
Ciclev10021312m.g Citrus clementina Ciclev10021312m.g N
PRUPE_ppa009628mg Prunus persica PRUPE_ppa009628mg N
GRMZM2G062009 Zea mays GRMZM2G062009 N
MLOC_12466 Hordeum vulgare MLOC_12466 N
LPERR02G20100 Leersia perrieri LPERR02G20100 N
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N
GSMUA_Achr8G18980_001 Musa acuminata GSMUA_Achr8G18980_001 N
GSMUA_Achr5G18670_001 Musa acuminata GSMUA_Achr5G18670_001 N
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N
GSMUA_Achr1G10860_001 Musa acuminata GSMUA_Achr1G10860_001 N
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N
GSMUA_Achr11G00880_001 Musa acuminata GSMUA_Achr11G00880_001 N
GRMZM2G081930 Zea mays GRMZM2G081930 N
MLOC_5165 Hordeum vulgare MLOC_5165 N
GRMZM2G043813 Zea mays GRMZM2G043813 N
GLYMA19G34881 Glycine max GLYMA19G34881 N
GLYMA13G18620 Glycine max GLYMA13G18620 N
GLYMA10G04350 Glycine max GLYMA10G04350 N
GLYMA03G32116 Glycine max GLYMA03G32116 N
F775_17109 Aegilops tauschii F775_17109 N
F775_08585 Aegilops tauschii F775_08585 N
BRADI5G15587 Brachypodium distachyon BRADI5G15587 N
BGIOSGA016756 Oryza indica BGIOSGA016756 N
OLONG_011232 Oryza longistaminata OLONG_011232 N
PGSC0003DMG400025505 Solanum tuberosum PGSC0003DMG400025505 N
PGSC0003DMG400010294 Solanum tuberosum PGSC0003DMG400010294 N
OS04G0515900 Oryza sativa OS04G0515900 N
ORUFI04G20200 Oryza rufipogon ORUFI04G20200 N
ORUFI02G25930 Oryza rufipogon ORUFI02G25930 N
ORGLA04G0158100 Oryza glaberrima ORGLA04G0158100 N
OPUNC04G16450 Oryza punctata OPUNC04G16450 N
ONIVA04G01950 Oryza nivara ONIVA04G01950 N
ONIVA02G26880 Oryza nivara ONIVA02G26880 N
OMERI02G24100 Oryza meridionalis OMERI02G24100 N
BGIOSGA007201 Oryza indica BGIOSGA007201 N
OLONG_000596 Oryza longistaminata OLONG_000596 N
OGLUM04G18750 Oryza glumaepatula OGLUM04G18750 N
OGLUM02G24950 Oryza glumaepatula OGLUM02G24950 N
OBART04G18700 Oryza barthii OBART04G18700 N
OBART02G24560 Oryza barthii OBART02G24560 N
OB04G25790 Oryza brachyantha OB04G25790 N
OB02G31950 Oryza brachyantha OB02G31950 N
MTR_7g097090 Medicago truncatula MTR_7g097090 N
MTR_1g069805 Medicago truncatula MTR_1g069805 N