OLONG_010000 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_010000 T275918_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.785 0.849
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.785 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_010000-R1 Myb 146 192
OLONG_010000-R1 Myb 198 243

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
STAT3 Anolis carolinensis ENSACAG00000017940 I 0.000
ENSAMXG00000000502 Astyanax mexicanus ENSAMXG00000000502 I 0.000
STAT3 Gorilla gorilla ENSGGOG00000017110 I 0.000
ENSLACG00000012019 Latimeria chalumnae ENSLACG00000012019 I 0.000
stat3 Oryzias latipes ENSORLG00000004061 I 0.000
ENSPMAG00000002770 Petromyzon marinus ENSPMAG00000002770 I 0.000
STAT3 Taeniopygia guttata ENSTGUG00000002600 I 0.000
ENSTNIG00000011706 Tetraodon nigroviridis ENSTNIG00000011706 I 0.000
Pvit_13933 Pogona vitticeps Pvit_13933 I 0.000
stat3.2 Xenopus tropicalis XB-GENE-1020976 I 0.000
stat3.2.L Xenopus laevis XB-GENE-1020979 I 0.000