OLONG_013725 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_013725 T275940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.792 0.894
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.792 0.872
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.792 0.872
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.792 0.872
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.774 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_013725-R1 Myb 213 263

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5DS_620A46565 Triticum aestivum Traes_5DS_620A46565 N 0.000
OS06G0166100 Oryza sativa OS06G0166100 N 0.000
OS12G0160900 Oryza sativa OS12G0160900 N 0.000
Sb02g034560 Sorghum bicolor Sb02g034560 N 0.000
Sb08g003780 Sorghum bicolor Sb08g003780 N 0.000
Si009370m.g Setaria italica Si009370m.g N 0.000
Si029002m.g Setaria italica Si029002m.g N 0.000
Traes_4AL_8B3A3CC2F Triticum aestivum Traes_4AL_8B3A3CC2F N 0.000
Traes_5AS_385093B54 Triticum aestivum Traes_5AS_385093B54 N 0.000
Traes_5BS_BCC406654 Triticum aestivum Traes_5BS_BCC406654 N 0.000
OS02G0550900 Oryza sativa OS02G0550900 N 0.000
Traes_7BS_1B525AFF5 Triticum aestivum Traes_7BS_1B525AFF5 N 0.000
Traes_7DS_016F8E2EA Triticum aestivum Traes_7DS_016F8E2EA N 0.000
Traes_7DS_559DD9894 Triticum aestivum Traes_7DS_559DD9894 N 0.000
TRIUR3_03719 Triticum urartu TRIUR3_03719 N 0.000
TRIUR3_25143 Triticum urartu TRIUR3_25143 N 0.000
Pavir.Ba00843 Panicum virgatum Pavir.Ba00843 N 0.000
Pavir.Bb02863 Panicum virgatum Pavir.Bb02863 N 0.000
Pavir.Ca00202 Panicum virgatum Pavir.Ca00202 N 0.000
Pavir.Cb02030 Panicum virgatum Pavir.Cb02030 N 0.000
OB06G14070 Oryza brachyantha OB06G14070 N 0.000
BGIOSGA022378 Oryza indica BGIOSGA022378 N 0.000
BGIOSGA037035 Oryza indica BGIOSGA037035 N 0.000
BRADI1G48350 Brachypodium distachyon BRADI1G48350 N 0.000
BRADI4G41960 Brachypodium distachyon BRADI4G41960 N 0.000
GRMZM2G034868 Zea mays GRMZM2G034868 N 0.000
GRMZM2G048987 Zea mays GRMZM2G048987 N 0.000
MLOC_13034 Hordeum vulgare MLOC_13034 N 0.000
MLOC_43316 Hordeum vulgare MLOC_43316 N 0.000
MLOC_62808 Hordeum vulgare MLOC_62808 N 0.000
BGIOSGA006277 Oryza indica BGIOSGA006277 N 0.000
OB12G13670 Oryza brachyantha OB12G13670 N 0.000
OLONG_000187 Oryza longistaminata OLONG_000187 N 0.000
OLONG_002410 Oryza longistaminata OLONG_002410 N 0.000
OLONG_014957 Oryza longistaminata OLONG_014957 N 0.000
ONIVA02G22250 Oryza nivara ONIVA02G22250 N 0.000
ONIVA06G05610 Oryza nivara ONIVA06G05610 N 0.000
ORGLA02G0172700 Oryza glaberrima ORGLA02G0172700 N 0.000
ORGLA06G0040800 Oryza glaberrima ORGLA06G0040800 N 0.000
ORGLA12G0035900 Oryza glaberrima ORGLA12G0035900 N 0.000