OMERI02G27330 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI02G27330 T276049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.774 0.804
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.774 0.804
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.774 0.804
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.771 0.804
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.771 0.804
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.771 0.804
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.771 0.804
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.771 0.804
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.766 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.753 0.804
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.753 0.804
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.744 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.698 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.698 0.739
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.671 0.630
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.671 0.630
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.671 0.630
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI02G27330.1 Myb 73 118

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PMAA_052840 Penicillium marneffei PMAA_052840 I
CGGC5_7827 Colletotrichum gloeosporioides CGGC5_7827 I
PMAA_052840 Talaromyces marneffei PMAA_052840 I
MGG_07386 Magnaporthe oryzae MGG_07386 N
estExt_fgenesh1_pg.C_80373 Cryphonectria parasitica estExt_fgenesh1_pg.C_80373 N
e_gw1.9.18.1 Nectria haematococca e_gw1.9.18.1 N
Z517_05565 Fonsecaea pedrosoi Z517_05565 N
VDBG_09240 Verticillium alfalfae VDBG_09240 N
SAPIO_CDS7742 Scedosporium apiospermum SAPIO_CDS7742 N
PVAR5_7652 Byssochlamys spectabilis PVAR5_7652 N
PV07_03085 Cladophialophora immunda PV07_03085 N
PFICI_05072 Pestalotiopsis fici PFICI_05072 N
PFICI_04048 Pestalotiopsis fici PFICI_04048 N
OCS_03672 Ophiocordyceps sinensis OCS_03672 N
NechaG45265 Fusarium solani NechaG45265 N
VDBG_09240 Verticillium albo atrum VDBG_09240 N
MAPG_09245 Magnaporthe poae MAPG_09245 N
GLRG_11053 Colletotrichum graminicola GLRG_11053 N
GGTG_12739 Gaeumannomyces graminis GGTG_12739 N
G647_06217 Cladophialophora carrionii G647_06217 N
EURHEDRAFT_413664 Aspergillus ruber EURHEDRAFT_413664 N
CSUB01_08092 Colletotrichum sublineola CSUB01_08092 N
Cob_00662 Colletotrichum orbiculare Cob_00662 N
CH063_11411 Colletotrichum higginsianum CH063_11411 N
CGGC5_10999 Colletotrichum gloeosporioides CGGC5_10999 N
NFIA_092930 Neosartorya fischeri CADNFIAG00007525 N
AFUA_2G17511 Aspergillus fumigatus CADAFUAG00004564 N
ACLA_076400 Aspergillus clavatus CADACLAG00006786 N