OMERI04G19240 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI04G19240 T276089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CCA1
M00875_2.00
Arabidopsis thaliana
NDNRWATCN

NGATWYNHN
PBM
Franco-Zorrilla et al.(2014)
CCA1
0.746 0.717
RVE7
M01069_2.00
Arabidopsis thaliana
NDHRWATCNN

NNGATWYDHN
PBM
Sullivan et al.(2014)
pTH7081
0.805 0.804
CCA1
M11039_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CCA1_Q5
0.746 0.717
RVE7
M02286_2.00
Arabidopsis thaliana
NDARTATCH

DGATAYTHN
PBM
Weirauch et al.(2014)
pTH7277
0.805 0.804
RVE7L
M07071_2.00
Arabidopsis thaliana
NNNNWAAATATCWNN

NNWGATATTTWNNNN
Dap-seq
OMalley et al.(2016)
AT3G10113_col_a
0.805 0.804
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN

NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.734 0.717
RVE7
M07008_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
EPR1_colamp_a
0.805 0.804
RVE7
M07009_2.00
Arabidopsis thaliana
NWAAATATCTHN

NDAGATATTTWN
Dap-seq
OMalley et al.(2016)
EPR1_col
0.805 0.804
LHY
M06997_2.00
Arabidopsis thaliana
NWAAATATCT

AGATATTTWN
Dap-seq
OMalley et al.(2016)
LHY1_col_a
0.788 0.848
LHY
M06998_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
LHY1_colamp_a
0.788 0.848
OS08G0157600
M02330_2.00
Oryza sativa
DNRTATCHN

NDGATAYNH
PBM
Weirauch et al.(2014)
pTH7793
0.778 0.804
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT

AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.758 0.783
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN

NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.758 0.783
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW

WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.758 0.783
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI04G19240.1 Myb 59 111
OMERI04G19240.2 Myb 59 104
OMERI04G19240.3 Myb 59 104

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFP37 Canis familiaris ENSCAFG00000028890 N
ZFP37 Callithrix jacchus ENSCJAG00000017766 N
ENSCSAG00000012373 Chlorocebus sabaeus ENSCSAG00000012373 N
ZFP37 Dasypus novemcinctus ENSDNOG00000048008 N
ZFP37 Homo sapiens ENSG00000136866 N
ZFP37 Gorilla gorilla ENSGGOG00000000731 N
ZFP37 Microcebus murinus ENSMICG00000001134 N
ZFP37 Macaca mulatta ENSMMUG00000002079 N
ENSNLEG00000016581 Nomascus leucogenys ENSNLEG00000016581 N
ENSPANG00000025771 Papio anubis ENSPANG00000025771 N
ZFP37 Pan troglodytes ENSPTRG00000021269 N
ZFP37 Tursiops truncatus ENSTTRG00000009049 N
ZFP37 Vicugna pacos ENSVPAG00000010606 N
ENSP00000363344 Macaca fascicularis ENSP00000363344 N