OMERI12G14000 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI12G14000 T276183_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.782 0.844
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.680 0.667
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.671 0.822
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI12G14000.2 Myb 13 63
OMERI12G14000.3 Myb 13 63

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N
OMERI12G13180 Oryza meridionalis OMERI12G13180 N
ONIVA07G09980 Oryza nivara ONIVA07G09980 N
ONIVA07G13650 Oryza nivara ONIVA07G13650 N
ONIVA12G17390 Oryza nivara ONIVA12G17390 N
OPUNC12G16690 Oryza punctata OPUNC12G16690 N
ORGLA07G0123600 Oryza glaberrima ORGLA07G0123600 N
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N
ORUFI07G15560 Oryza rufipogon ORUFI07G15560 N
OMERI09G11810 Oryza meridionalis OMERI09G11810 N
OS12G0610600 Oryza sativa OS12G0610600 N
Si014408m.g Setaria italica Si014408m.g N
Si030942m.g Setaria italica Si030942m.g N
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N
Aquca_003_00875 Aquilegia coerulea Aquca_003_00875 N
Pavir.J11699 Panicum virgatum Pavir.J11699 N
Pavir.J23083 Panicum virgatum Pavir.J23083 N
MLOC_64240 Hordeum vulgare MLOC_64240 N
BGIOSGA037778 Oryza indica BGIOSGA037778 N
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N
F775_31820 Aegilops tauschii F775_31820 N
GRMZM2G054277 Zea mays GRMZM2G054277 N
GRMZM2G179049 Zea mays GRMZM2G179049 N
LPERR12G15510 Leersia perrieri LPERR12G15510 N
MLOC_55957 Hordeum vulgare MLOC_55957 N
BGIOSGA025747 Oryza indica BGIOSGA025747 N
MLOC_72553 Hordeum vulgare MLOC_72553 N
OB09G22520 Oryza brachyantha OB09G22520 N
OB12G25170 Oryza brachyantha OB12G25170 N
OBART12G18490 Oryza barthii OBART12G18490 N
OGLUM07G14740 Oryza glumaepatula OGLUM07G14740 N
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N
OMERI07G11790 Oryza meridionalis OMERI07G11790 N