ONIVA10G21110 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA10G21110 T276385_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.745 0.851
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.734 0.809
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.732 0.809
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.732 0.809
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.732 0.809
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.720 0.809
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.720 0.809
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.720 0.809
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.717 0.830
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.716 0.830
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.707 0.809
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.707 0.809
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.706 0.787
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.706 0.787
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.706 0.787
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.696 0.787
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.696 0.787
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.685 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA10G21110.1 Myb 98 145

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

522 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH48 Arabidopsis thaliana AT2G42300 I 0.000
MLOC_64018 Hordeum vulgare MLOC_64018 I 0.000
PGSC0003DMG400008805 Solanum tuberosum PGSC0003DMG400008805 I 0.000
orange1.1g014374m.g Citrus sinensis orange1.1g014374m.g I 0.000
SapurV1A.0018s0230 Salix purpurea SapurV1A.0018s0230 I 0.000
OMERI01G06290 Oryza meridionalis OMERI01G06290 N 0.000
OMERI12G12420 Oryza meridionalis OMERI12G12420 N 0.000
ONIVA03G30270 Oryza nivara ONIVA03G30270 N 0.000
ORGLA04G0184100 Oryza glaberrima ORGLA04G0184100 N 0.000
ORUFI03G30210 Oryza rufipogon ORUFI03G30210 N 0.000
Traes_4DS_069F2900B Triticum aestivum Traes_4DS_069F2900B N 0.000
Traes_4DS_ECE3F21FA Triticum aestivum Traes_4DS_ECE3F21FA N 0.000
VIT_00s0384g00020 Vitis vinifera VIT_00s0384g00020 N 0.000
Eucgr.H02392 Eucalyptus grandis Eucgr.H02392 N 0.000
Pavir.Ba03259 Panicum virgatum Pavir.Ba03259 N 0.000
Pavir.Ca02967 Panicum virgatum Pavir.Ca02967 N 0.000