CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

PGSC0003DMG400023534 *(Solanum tuberosum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	PGSC0003DMG400023534	T277665_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
e_gw1.362.4.1 M02341_2.00	Physcomitrella patens	NNNRDATCNN	NNGATHYNNN	PBM Weirauch et al.(2014) pTH8461	0.870	0.936
estExt_fgenesh1_pg.C_Chr_16.00010090 M02367_2.00	Ostreococcus tauri	NNNDATCN	NGATHNNN	PBM Weirauch et al.(2014) pTH9644	0.809	0.872
ARR14 M00873_2.00	Arabidopsis thaliana	NNAGATHCKS	SMGDATCTNN	PBM Franco-Zorrilla et al.(2014) ARR14	0.805	0.872
ARR14 M02293_2.00	Arabidopsis thaliana	NAGATHYBNN	NNVRDATCTN	PBM Weirauch et al.(2014) pTH7531	0.805	0.872
ARR1 M02296_2.00	Arabidopsis thaliana	NDGATHYBNN	NNVRDATCHN	PBM Weirauch et al.(2014) pTH8257	0.804	0.936
ARR1 M02297_2.00	Arabidopsis thaliana	NAAGATHCKN	NMGDATCTTN	PBM Weirauch et al.(2014) pTH8590	0.802	0.936
ARR18 M02313_2.00	Arabidopsis thaliana	NNNNAGATAYGNN	NNCRTATCTNNNN	PBM Weirauch et al.(2014) pTH8840	0.689	0.851
AT5G05090 M02305_2.00	Arabidopsis thaliana	NHAGATHCKNN	NNMGDATCTDN	PBM Weirauch et al.(2014) pTH7104	0.675	0.702
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
PGSC0003DMT400060506	Myb	221	271	RVVWSVELHQQFVQAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYR
PGSC0003DMT400060507	Myb	221	250	RVVWSVELHQQFVQAVNQLGIDSMHLLAIS

Links
Other Myb/SANT family TFs
Other *Solanum tuberosum* TFs