CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITG_13133
(
Phytophthora infestans
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PITG_13133
T278081_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra73031
M02332_2.00
Phytophthora ramorum
NDRKTCAGTN
NACTGAMYHN
PBM
Weirauch et al.(2014)
pTH7816
0.774
0.790
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_13133T0
Myb
82
128
PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVL
PITG_13133T0
Myb
134
179
KGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHL
PITG_13133T0
Myb
185
229
RGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSL
Links
Other
Myb/SANT
family TFs
Other
Phytophthora infestans
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001414301
Angiostrongylus cantonensis
ACAC_0001414301
N
ACOC_0001118201
Angiostrongylus costaricensis
ACOC_0001118201
N
ANCCAN_02274
Ancylostoma caninum
ANCCAN_02274
N
ANCCEY_00687
Ancylostoma ceylanicum
ANCCEY_00687
N
DICVIV_05073
Dictyocaulus viviparus
DICVIV_05073
N
HPBE_0001196101
Heligmosomoides bakeri
HPBE_0001196101
N
NECAME_10616
Necator americanus
NECAME_10616
N