Sb07g003870 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb07g003870 T279261_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.891 0.978
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.881 0.913
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.881 0.913
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.845 0.870
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.845 0.870
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.795 0.870
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.795 0.870
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.795 0.870
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.790 0.783
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.790 0.783
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.790 0.783
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.790 0.783
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.790 0.783
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.775 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g003870.1 Myb 51 96

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PABG_02907 Paracoccidioides brasiliensis PABG_02907 I 0.000
PTT_13020 Pyrenophora teres PTT_13020 I 0.000
PTRG_00243 Pyrenophora triticirepentis PTRG_00243 I 0.000
PMAA_024740 Talaromyces marneffei PMAA_024740 I 0.000
PITC_027910 Penicillium italicum PITC_027910 I 0.000
PEX1_076370 Penicillium expansum PEX1_076370 I 0.000
PDIP_73930 Penicillium digitatum PDIP_73930 I 0.000
PDE_02765 Penicillium oxalicum PDE_02765 I 0.000
PCH_Pc18g02200 Penicillium rubens PCH_Pc18g02200 I 0.000
PV09_02665 Verruconis gallopava PV09_02665 I 0.000
PAAG_08645 Paracoccidioides sp lutzii PAAG_08645 I 0.000
OIDMADRAFT_60194 Oidiodendron maius OIDMADRAFT_60194 I 0.000
MYCTH_2304200 Myceliophthora thermophila MYCTH_2304200 I 0.000
MPH_05713 Macrophomina phaseolina MPH_05713 I 0.000
MCYG_00903 Arthroderma otae MCYG_00903 I 0.000
M438DRAFT_281095 Aureobasidium pullulans M438DRAFT_281095 I 0.000
M437DRAFT_83473 Aureobasidium melanogenum M437DRAFT_83473 I 0.000
MCYG_00903 Microsporum canis MCYG_00903 I 0.000
PVAR5_6448 Byssochlamys spectabilis PVAR5_6448 I 0.000
SAPIO_CDS5850 Scedosporium apiospermum SAPIO_CDS5850 I 0.000
SBOR_2000 Sclerotinia borealis SBOR_2000 I 0.000
SETTUDRAFT_102560 Setosphaeria turcica SETTUDRAFT_102560 I 0.000
SMAC_08830 Sordaria macrospora SMAC_08830 I 0.000
SNOG_11811 Phaeosphaeria nodorum SNOG_11811 I 0.000
SS1G_06977 Sclerotinia sclerotiorum SS1G_06977 I 0.000
TSTA_033430 Talaromyces stipitatus TSTA_033430 I 0.000
U727_00431293291 Penicillium solitum U727_00431293291 I 0.000
UCRNP2_6191 Neofusicoccum parvum UCRNP2_6191 I 0.000
VDAG_06431 Verticillium dahliae VDAG_06431 I 0.000
W97_02650 Coniosporium apollinis W97_02650 I 0.000
AB04375.1 Alternaria brassicicola AB04375.1 I 0.000
e_gw1.00129.236.1 Aspergillus carbonarius e_gw1.00129.236.1 I 0.000
Pc18g02200 Penicillium chrysogenum Pc18g02200 I 0.000
CFIO01_11469 Colletotrichum fioriniae CFIO01_11469 I 0.000
COCVIDRAFT_34345 Bipolaris victoriae COCVIDRAFT_34345 I 0.000
LEMA_P018010.1 Leptosphaeria maculans LEMA_P018010.1 I 0.000
COCMIDRAFT_84665 Bipolaris oryzae COCMIDRAFT_84665 I 0.000
COCCADRAFT_37717 Bipolaris zeicola COCCADRAFT_37717 I 0.000
COCC4DRAFT_126547 Bipolaris maydis COCC4DRAFT_126547 I 0.000
Cob_12532 Colletotrichum orbiculare Cob_12532 I 0.000
CHGG_02890 Chaetomium globosum CHGG_02890 I 0.000
CGGC5_5606 Colletotrichum gloeosporioides CGGC5_5606 I 0.000
COCSADRAFT_102727 Bipolaris sorokiniana COCSADRAFT_102727 I 0.000
NFIA_019220 Neosartorya fischeri CADNFIAG00000884 I 0.000
ATEG_03075 Aspergillus terreus CADATEAG00010055 I 0.000
ANIA_04077 Aspergillus nidulans CADANIAG00004604 I 0.000
Bcin10g03410 Botrytis cinerea Bcin10g03410 I 0.000
BAUCODRAFT_144230 Baudoinia compniacensis BAUCODRAFT_144230 I 0.000
AUEXF2481DRAFT_4398 Aureobasidium subglaciale AUEXF2481DRAFT_4398 I 0.000
AOL_s00054g326 Arthrobotrys oligospora AOL_s00054g326 I 0.000
CIMG_03917 Coccidioides immitis CIMG_03917 I 0.000
CTHT_0024110 Chaetomium thermophilum CTHT_0024110 I 0.000
DOTSEDRAFT_68166 Dothistroma septosporum DOTSEDRAFT_68166 I 0.000
DRE_01415 Drechslerella stenobrocha DRE_01415 I 0.000
EPUS_04985 Endocarpon pusillum EPUS_04985 I 0.000
EURHEDRAFT_458005 Aspergillus ruber EURHEDRAFT_458005 I 0.000
CPC735_004330 Coccidioides posadasii CPC735_004330 I 0.000
GLRG_03674 Colletotrichum graminicola GLRG_03674 I 0.000
H072_1719 Dactylellina haptotyla H072_1719 I 0.000
HCBG_06971 Histoplasma capsulatum HCBG_06971 I 0.000
HMPREF1624_06509 Sporothrix schenckii HMPREF1624_06509 N 0.000
HMPREF1541_09623 Cyphellophora europaea HMPREF1541_09623 N 0.000
MAJ_01159 Metarhizium majus MAJ_01159 N 0.000
MGU_01854 Metarhizium guizhouense MGU_01854 N 0.000
H105_07872 Trichophyton soudanense H105_07872 N 0.000
MYCFIDRAFT_97410 Pseudocercospora fijiensis MYCFIDRAFT_97410 N 0.000
H102_07847 Trichophyton rubrum H102_07847 N 0.000
TEQG_01462 Trichophyton equinum TEQG_01462 N 0.000
H101_07436 Trichophyton interdigitale H101_07436 N 0.000
SPBR_00313 Sporothrix brasiliensis SPBR_00313 N 0.000
CMQ_7525 Grosmannia clavigera CMQ_7525 N 0.000
SEPMUDRAFT_146146 Sphaerulina musiva SEPMUDRAFT_146146 N 0.000