Sb10g000590 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb10g000590 T279323_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.857 0.957
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.849 0.913
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.849 0.913
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.849 0.913
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.849 0.913
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.849 0.913
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.847 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.847 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.847 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.834 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.819 0.891
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.819 0.891
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.819 0.891
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.704 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.704 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.704 0.674
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.672 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb10g000590.1 Myb 73 118

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M404DRAFT_131346 Pisolithus tinctorius M404DRAFT_131346 N 0.000
estExt_Genewise1.C_31743 Heterobasidion annosum estExt_Genewise1.C_31743 N 0.000
SERLA73DRAFT_73137 Serpula lacrymans SERLA73DRAFT_73137 N 0.000
SCHCODRAFT_78089 Schizophyllum commune SCHCODRAFT_78089 N 0.000
PLEOSDRAFT_1064697 Pleurotus ostreatus PLEOSDRAFT_1064697 N 0.000
PISMIDRAFT_373909 Pisolithus microcarpus PISMIDRAFT_373909 N 0.000
PILCRDRAFT_576092 Piloderma croceum PILCRDRAFT_576092 N 0.000
PHLGIDRAFT_206888 Phlebiopsis gigantea PHLGIDRAFT_206888 N 0.000
PHACADRAFT_258894 Phanerochaete carnosa PHACADRAFT_258894 N 0.000
Moror_4260 Moniliophthora roreri Moror_4260 N 0.000
M413DRAFT_73484 Hebeloma cylindrosporum M413DRAFT_73484 N 0.000
AGABI2DRAFT_192596 Agaricus bisporus AGABI2DRAFT_192596 N 0.000
M378DRAFT_186008 Amanita muscaria M378DRAFT_186008 N 0.000
LACBIDRAFT_313614 Laccaria bicolor LACBIDRAFT_313614 N 0.000
K443DRAFT_676668 Laccaria amethystina K443DRAFT_676668 N 0.000
JAAARDRAFT_691687 Jaapia argillacea JAAARDRAFT_691687 N 0.000
HETIRDRAFT_33922 Heterobasidion irregulare HETIRDRAFT_33922 N 0.000
GLOTRDRAFT_73695 Gloeophyllum trabeum GLOTRDRAFT_73695 N 0.000
GALMADRAFT_68262 Galerina marginata GALMADRAFT_68262 N 0.000
FOMPIDRAFT_1021882 Fomitopsis pinicola FOMPIDRAFT_1021882 N 0.000
CY34DRAFT_384093 Suillus luteus CY34DRAFT_384093 N 0.000
BN946_scf184665.g22 Trametes cinnabarina BN946_scf184665.g22 N 0.000