CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold_303375.1
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
scaffold_303375.1
T279382_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_303375.1
Myb
46
96
RLRWSRDLHDCFVTAVEKLGGPDKATPKSVKETMEVEGIALHHVKSHLQND
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT2G06020
Arabidopsis thaliana
AT2G06020
N
0.804
Bra015134
Brassica rapa
Bra015134
N
0.795
fgenesh1_pm.C_scaffold_3002359
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_3002359
N
0.856
Bostr.24399s0035
Boechera stricta
Bostr.24399s0035
N
0.804
Carubv10016382m.g
Capsella rubella
Carubv10016382m.g
N
0.804
Thhalv10002873m.g
Eutrema salsugineum
Thhalv10002873m.g
N
0.794