Solyc04g045430.2 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc04g045430.2 T280100_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.909 0.957
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.909 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g045430.2.1 Myb 31 98

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00491 Aegilops tauschii F775_00491 N 0.000
MLOC_50426 Hordeum vulgare MLOC_50426 N 0.000
MLOC_6565 Hordeum vulgare MLOC_6565 N 0.000
Traes_7AS_B9912B88F Triticum aestivum Traes_7AS_B9912B88F N 0.000
TRIUR3_07297 Triticum urartu TRIUR3_07297 N 0.000
TRIUR3_08238 Triticum urartu TRIUR3_08238 N 0.000