TCM_012262 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_012262 T280484_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G49010
M01269_2.00 		Arabidopsis thaliana
NNYWATCNN
NNGATWRNN		 PBM
Lambert et al.(2019)
pTH11535 		0.764 0.848
AT1G49010
M07022_2.00 		Arabidopsis thaliana
NHHWWYCTTATCYWH
DWRGATAAGRWWDDN		 Dap-seq
OMalley et al.(2016)
At1g49010_col_a 		0.764 0.848
AT1G49010
M07023_2.00 		Arabidopsis thaliana
WWYCTTATCYWHWHH
DDWDWRGATAAGRWW		 Dap-seq
OMalley et al.(2016)
At1g49010_colamp_a 		0.764 0.848
PK19621.1
M01280_2.00 		Cannabis sativa
NNTTATCYN
NRGATAANN		 PBM
Lambert et al.(2019)
pTH10140 		0.726 0.837
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY20939 Myb 135 180

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_6BS_AEF9F3C00 Triticum aestivum Traes_6BS_AEF9F3C00 N
Traes_6DS_48337A953 Triticum aestivum Traes_6DS_48337A953 N
Traes_6DS_3D1A837E3 Triticum aestivum Traes_6DS_3D1A837E3 N
Traes_6DS_2185308F3 Triticum aestivum Traes_6DS_2185308F3 N
Traes_6DS_186AD71E4 Triticum aestivum Traes_6DS_186AD71E4 N
Traes_6BS_FA68506CF Triticum aestivum Traes_6BS_FA68506CF N
Traes_6BS_EE1BBAFD1 Triticum aestivum Traes_6BS_EE1BBAFD1 N
Traes_6BS_D8B7C37B0 Triticum aestivum Traes_6BS_D8B7C37B0 N
Traes_6BS_C3247654A Triticum aestivum Traes_6BS_C3247654A N
Traes_6DS_5878FA87F Triticum aestivum Traes_6DS_5878FA87F N
Traes_6BS_7F1846171 Triticum aestivum Traes_6BS_7F1846171 N
Traes_6BS_4D22F1222 Triticum aestivum Traes_6BS_4D22F1222 N
Traes_6BS_3A00751B5 Triticum aestivum Traes_6BS_3A00751B5 N
Traes_6BL_A62A29F7B Triticum aestivum Traes_6BL_A62A29F7B N
Traes_6AS_E6F39D946 Triticum aestivum Traes_6AS_E6F39D946 N
Traes_6AS_D5A6B2CDD Triticum aestivum Traes_6AS_D5A6B2CDD N
Traes_6AS_B24138E62 Triticum aestivum Traes_6AS_B24138E62 N
Traes_6AS_7B7540F6D Triticum aestivum Traes_6AS_7B7540F6D N
Traes_6DS_79BC66C99 Triticum aestivum Traes_6DS_79BC66C99 N
Traes_6DS_87E97B55C Triticum aestivum Traes_6DS_87E97B55C N
Traes_6DS_931C28AF6 Triticum aestivum Traes_6DS_931C28AF6 N
Traes_6DS_BF460054E Triticum aestivum Traes_6DS_BF460054E N
Traes_6DS_E67EB0CBE Triticum aestivum Traes_6DS_E67EB0CBE N
Traes_7BS_598310C32 Triticum aestivum Traes_7BS_598310C32 N
Traes_7BS_E70858C081 Triticum aestivum Traes_7BS_E70858C081 N
Traes_7DS_5B1210681 Triticum aestivum Traes_7DS_5B1210681 N
TRIUR3_05572 Triticum urartu TRIUR3_05572 N
TRIUR3_06343 Triticum urartu TRIUR3_06343 N
TRIUR3_06344 Triticum urartu TRIUR3_06344 N
TRIUR3_06575 Triticum urartu TRIUR3_06575 N
TRIUR3_12443 Triticum urartu TRIUR3_12443 N
TRIUR3_26568 Triticum urartu TRIUR3_26568 N
TRIUR3_31592 Triticum urartu TRIUR3_31592 N
F775_16500 Aegilops tauschii F775_16500 N
MLOC_56903 Hordeum vulgare MLOC_56903 N
MLOC_14883 Hordeum vulgare MLOC_14883 N
GRMZM2G060114 Zea mays GRMZM2G060114 N
F775_27817 Aegilops tauschii F775_27817 N
F775_21193 Aegilops tauschii F775_21193 N
F775_18978 Aegilops tauschii F775_18978 N
F775_18370 Aegilops tauschii F775_18370 N
F775_17151 Aegilops tauschii F775_17151 N
MLOC_68932 Hordeum vulgare MLOC_68932 N
F775_16499 Aegilops tauschii F775_16499 N
F775_13425 Aegilops tauschii F775_13425 N
F775_13070 Aegilops tauschii F775_13070 N
F775_12825 Aegilops tauschii F775_12825 N
F775_01974 Aegilops tauschii F775_01974 N
BRADI3G00840 Brachypodium distachyon BRADI3G00840 N
BRADI1G45320 Brachypodium distachyon BRADI1G45320 N
BGIOSGA021625 Oryza indica BGIOSGA021625 N
OB06G17650 Oryza brachyantha OB06G17650 N
OBART06G07940 Oryza barthii OBART06G07940 N
OPUNC06G07700 Oryza punctata OPUNC06G07700 N
Traes_1AL_3C796C3D3 Triticum aestivum Traes_1AL_3C796C3D3 N
Traes_1AL_C6CACDF78 Triticum aestivum Traes_1AL_C6CACDF78 N
Traes_1BL_A8B8F33D9 Triticum aestivum Traes_1BL_A8B8F33D9 N
Traes_1BS_613E9DBA6 Triticum aestivum Traes_1BS_613E9DBA6 N
Traes_1DL_5E046EFA0 Triticum aestivum Traes_1DL_5E046EFA0 N
Traes_3AS_D6334436F Triticum aestivum Traes_3AS_D6334436F N
TRAES3BF261600050CFD_g Triticum aestivum TRAES3BF261600050CFD_g N
Traes_4AL_3A009739E Triticum aestivum Traes_4AL_3A009739E N
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N
Traes_6AS_2FC18A5B9 Triticum aestivum Traes_6AS_2FC18A5B9 N
Traes_6AS_36EAEADDD Triticum aestivum Traes_6AS_36EAEADDD N
Traes_6AS_48B701BB41 Triticum aestivum Traes_6AS_48B701BB41 N