CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_6AL_FF1508B19
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_6AL_FF1508B19
T281230_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.821
0.892
RAX3
M11043_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.821
0.892
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_6AL_FF1508B19.1
Myb
14
62
KGPWSPEEDAKLKAYIDENGTGGNWIALPQKIGLKRCGKSCRLRWLNYL
Traes_6AL_FF1508B19.1
Myb
68
113
HGDFTEEEEHIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKL
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
475 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action