Traes_7DS_91CCCF6DB (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_7DS_91CCCF6DB T281375_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.748 0.763
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.708 0.763
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.708 0.763
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.706 0.785
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.706 0.785
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.703 0.753
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.676 0.742
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.676 0.742
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.676 0.774
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.676 0.774
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.662 0.720
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.662 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7DS_91CCCF6DB.1 Myb 15 62
Traes_7DS_91CCCF6DB.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

550 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G119823 Zea mays GRMZM2G119823 I
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N
Cucsa.282100 Cucumis sativus Cucsa.282100 N
Cla019147 Citrullus lanatus Cla019147 N
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N
Si010812m.g Setaria italica Si010812m.g N
Si010413m.g Setaria italica Si010413m.g N
Sb07g004190 Sorghum bicolor Sb07g004190 N
OS04G0301500 Oryza sativa OS04G0301500 N
BGIOSGA040642 Oryza indica BGIOSGA040642 N
OPUNC04G05630 Oryza punctata OPUNC04G05630 N
ONIVA01G07170 Oryza nivara ONIVA01G07170 N
OMERI03G04020 Oryza meridionalis OMERI03G04020 N
OGLUM04G06620 Oryza glumaepatula OGLUM04G06620 N
MLOC_62844 Hordeum vulgare MLOC_62844 N
LPERR04G04520 Leersia perrieri LPERR04G04520 N
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N
GRMZM2G042895 Zea mays GRMZM2G042895 N
GRMZM2G042893 Zea mays GRMZM2G042893 N
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N