CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_08s0007g03820
(
Vitis vinifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
VIT_08s0007g03820
T281970_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_08s0007g03820.t01
Myb
111
171
TGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLY
VIT_08s0007g03820.t01
Myb
405
464
GDSWPESEITRLMQLRTNMESRFQQAGSSEEVLWEDIAGKMACLGYDRSAIMCKDKWNSI
Links
Other
Myb/SANT
family TFs
Other
Vitis vinifera
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA19G37660
Glycine max
GLYMA19G37660
N
0.664
PGSC0003DMG400002710
Solanum tuberosum
PGSC0003DMG400002710
N
0.749
POPTR_0008s02580
Populus trichocarpa
POPTR_0008s02580
N
0.666
POPTR_0010s24140
Populus trichocarpa
POPTR_0010s24140
N
0.672
TCM_022457
Theobroma cacao
TCM_022457
N
0.761
TCM_044087
Theobroma cacao
TCM_044087
N
0.661
29092.m000461
Ricinus communis
29092.m000461
N
0.782
cassava29591.valid.m1
Manihot esculenta
cassava29591.valid.m1
N
0.821
mgf013767m
Mimulus guttatus
mgf013767m
N
0.661
evm.TU.supercontig_5.72
Carica papaya
evm.TU.supercontig_5.72
N
0.693