Ca_14385 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_14385 T283038_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.892 0.957
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.892 0.957
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.892 0.957
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.803 0.870
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.794 0.891
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.785 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.785 0.848
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.749 0.826
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.749 0.826
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.740 0.696
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.740 0.696
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.740 0.696
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.720 0.783
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.720 0.783
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.720 0.783
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.720 0.783
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.720 0.783
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.699 0.696
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.665 0.674
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.665 0.674
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.665 0.674
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.665 0.652
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.665 0.652
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.665 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_14385 Myb 47 92

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

459 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pc18g02200 Penicillium chrysogenum Pc18g02200 I 0.000
ANIA_04077 Aspergillus nidulans CADANIAG00004604 I 0.000
U727_00431293291 Penicillium solitum U727_00431293291 I 0.000
PCH_Pc18g02200 Penicillium rubens PCH_Pc18g02200 I 0.000
PEX1_076370 Penicillium expansum PEX1_076370 I 0.000
PITC_027910 Penicillium italicum PITC_027910 I 0.000
PV04_02016 Capronia semiimmersa PV04_02016 N 0.000
Z519_03501 Cladophialophora bantiana Z519_03501 N 0.000
Z518_07944 Rhinocladiella mackenziei Z518_07944 N 0.000
Z517_08888 Fonsecaea pedrosoi Z517_08888 N 0.000
PV10_09038 Exophiala mesophila PV10_09038 N 0.000
PV08_06067 Exophiala spinifera PV08_06067 N 0.000
PV07_12748 Cladophialophora immunda PV07_12748 N 0.000
PV07_10758 Cladophialophora immunda PV07_10758 N 0.000
PV06_03658 Exophiala oligosperma PV06_03658 N 0.000
PV05_10912 Exophiala xenobiotica PV05_10912 N 0.000
A1O1_01039 Capronia coronata A1O1_01039 N 0.000
HMPREF1541_09623 Cyphellophora europaea HMPREF1541_09623 N 0.000
G647_00094 Cladophialophora carrionii G647_00094 N 0.000
A1O9_13137 Exophiala aquamarina A1O9_13137 N 0.000
A1O7_00084 Cladophialophora yegresii A1O7_00084 N 0.000
A1O5_04221 Cladophialophora psammophila A1O5_04221 N 0.000
A1O3_07515 Capronia epimyces A1O3_07515 N 0.000