29677.m000183 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29677.m000183 T283763_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.836 0.826
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.792 0.826
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.792 0.826
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.792 0.826
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.792 0.826
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.792 0.826
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.745 0.739
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.745 0.739
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.745 0.739
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.744 0.739
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.744 0.739
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.734 0.739
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.705 0.674
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.705 0.674
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.705 0.674
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.702 0.652
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.702 0.652
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.702 0.652
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.695 0.674
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.695 0.674
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.695 0.674
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.695 0.652
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.695 0.652
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.695 0.652
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.689 0.717
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.689 0.717
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.661 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29677.m000183 Myb 16 61

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

472 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZZZ3 Homo sapiens ENSG00000036549 D
Zzz3 Rattus norvegicus ENSRNOG00000050321 I
ZZZ3 Vicugna pacos ENSVPAG00000001421 I
ENSTSYG00000001826 Tarsius syrichta ENSTSYG00000001826 I
zzz3 Takifugu rubripes ENSTRUG00000006240 I
ENSTNIG00000006386 Tetraodon nigroviridis ENSTNIG00000006386 I
ZZZ3 Taeniopygia guttata ENSTGUG00000007000 I
ENSSTOG00000016454 Ictidomys tridecemlineatus ENSSTOG00000016454 I
ZZZ3 Sus scrofa ENSSSCG00000003772 I
ENSSHAG00000002082 Sarcophilus harrisii ENSSHAG00000002082 I
ZZZ3 Sorex araneus ENSSARG00000004268 I
ENSXMAG00000016350 Xiphophorus maculatus ENSXMAG00000016350 I
ZZZ3 Pteropus vampyrus ENSPVAG00000017539 I
ZZZ3 Pan troglodytes ENSPTRG00000000881 I
ENSPSIG00000011052 Pelodiscus sinensis ENSPSIG00000011052 I
ENSPPYG00000001223 Pongo abelii ENSPPYG00000001223 I
ENSPMAG00000000497 Petromyzon marinus ENSPMAG00000000497 I
ENSPFOG00000000834 Poecilia formosa ENSPFOG00000000834 I
ZZZ3 Procavia capensis ENSPCAG00000016692 I
ENSPANG00000005101 Papio anubis ENSPANG00000005101 I
zzz3 Oryzias latipes ENSORLG00000003342 I
Myotis_brandtii_ZZZ3_10032449 Myotis brandtii Myotis_brandtii_ZZZ3_10032449 I
XP_002939691 Xenopus tropicalis XP_002939691 I
zzz3 Xenopus tropicalis XB-GENE-993548 I
Sakowv30043886m.g Saccoglossus kowalevskii Sakowv30043886m.g I
Ocbimv22013214m.g Octopus bimaculoides Ocbimv22013214m.g I
fgenesh2_pg.scaffold_163000017 Branchiostoma floridae fgenesh2_pg.scaffold_163000017 I
fgenesh2_pg.scaffold_163000011 Branchiostoma floridae fgenesh2_pg.scaffold_163000011 I
Tal_R004642 Tyto alba Tal_R004642 I
Pvit_10393 Pogona vitticeps Pvit_10393 I
Ogr17321 Ophisaurus gracilis Ogr17321 I
ENSONIG00000018369 Oreochromis niloticus ENSONIG00000018369 I
Gfo_R009151 Geospiza fortis Gfo_R009151 I
ENSP00000359837 Macaca fascicularis ENSP00000359837 I
ENSBTAP00000041453-D1 Bos grunniens ENSBTAP00000041453-D1 I
Cmyd_10007243 Chelonia mydas Cmyd_10007243 I
Brh_R007515 Buceros rhinoceros Brh_R007515 I
Afo_R000910 Aptenodytes forsteri Afo_R000910 I
Aan_R000828 Calypte anna Aan_R000828 I
LotgiG187172 Lottia gigantea LotgiG187172 I
zzz3 Danio rerio ENSDARG00000077581 I
ZZZ3 Gorilla gorilla ENSGGOG00000009242 I
ZZZ3 Gallus gallus ENSGALG00000008988 I
zzz3 Gasterosteus aculeatus ENSGACG00000016546 I
ZZZ3 Felis catus ENSFCAG00000001415 I
ENSFALG00000005715 Ficedula albicollis ENSFALG00000005715 I
ZZZ3 Echinops telfairi ENSETEG00000013187 I
ZZZ3 Equus caballus ENSECAG00000011430 I
Zzz3 Dipodomys ordii ENSDORG00000010114 I
ENSDNOG00000000463 Dasypus novemcinctus ENSDNOG00000000463 I
ENSGMOG00000003250 Gadus morhua ENSGMOG00000003250 I
ENSCSAG00000001398 Chlorocebus sabaeus ENSCSAG00000001398 I
ENSCPOG00000003135 Cavia porcellus ENSCPOG00000003135 I
ZZZ3 Callithrix jacchus ENSCJAG00000006894 I
ZZZ3 Choloepus hoffmanni ENSCHOG00000007997 I
ZZZ3 Canis familiaris ENSCAFG00000020376 I
ZZZ3 Bos taurus ENSBTAG00000017419 I
ENSAPLG00000007892 Anas platyrhynchos ENSAPLG00000007892 I
ENSAMXG00000019065 Astyanax mexicanus ENSAMXG00000019065 I
ENSAMEG00000007243 Ailuropoda melanoleuca ENSAMEG00000007243 I
ENSMODG00000010367 Monodelphis domestica ENSMODG00000010367 I
ZZZ3 Anolis carolinensis ENSACAG00000006005 I
ZZZ3 Otolemur garnettii ENSOGAG00000014210 I
ZZZ3 Oryctolagus cuniculus ENSOCUG00000002167 I
ENSOARG00000013012 Ovis aries ENSOARG00000013012 I
ZZZ3 Ornithorhynchus anatinus ENSOANG00000015757 I
ENSNLEG00000009672 Nomascus leucogenys ENSNLEG00000009672 I
Zzz3 Mus musculus ENSMUSG00000039068 I
ENSMPUG00000010824 Mustela putorius furo ENSMPUG00000010824 I
ENSMODG00000024557 Monodelphis domestica ENSMODG00000024557 I
ZZZ3 Ochotona princeps ENSOPRG00000013036 I
ENSMODG00000010136 Monodelphis domestica ENSMODG00000010136 I
ENSMMUG00000020219 Macaca mulatta ENSMMUG00000020219 I
ZZZ3 Myotis lucifugus ENSMLUG00000006175 I
ZZZ3 Meleagris gallopavo ENSMGAG00000009582 I
ENSMEUG00000007391 Macropus eugenii ENSMEUG00000007391 I
ENSLOCG00000003656 Lepisosteus oculatus ENSLOCG00000003656 I
ZZZ3 Loxodonta africana ENSLAFG00000011398 I
ENSLACG00000009877 Latimeria chalumnae ENSLACG00000009877 I