Cucsa.139090 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.139090 T284434_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.714 0.840
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.714 0.840
AT5G58900
M07146_2.00 		Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD		 Dap-seq
OMalley et al.(2016)
At5g58900_col_a 		0.701 0.851
AT5G58900
M07147_2.00 		Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD		 Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a 		0.701 0.851
AT2G38090
M07055_2.00 		Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD		 Dap-seq
OMalley et al.(2016)
At2g38090_col_a 		0.690 0.809
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.679 0.819
AT3G11280
M01075_2.00 		Arabidopsis thaliana
NNTTATCNNN
NNNGATAANN		 PBM
Sullivan et al.(2014)
pTH7245 		0.676 0.766
AT3G11280
M07074_2.00 		Arabidopsis thaliana
DWDWDGATAAKRWW
WWYMTTATCHWHWH		 Dap-seq
OMalley et al.(2016)
At3g11280_col_a 		0.676 0.766
AT3G11280
M07075_2.00 		Arabidopsis thaliana
NNWNNDGATAAGRWHDNN
NNHDWYCTTATCHNNWNN		 Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a 		0.676 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.139090.1 Myb 133 180

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
E4F1 Homo sapiens ENSG00000167967 D
E4f1 Mus musculus ENSMUSG00000024137 D
Myotis_brandtii_E4f1_10005619 Myotis brandtii Myotis_brandtii_E4f1_10005619 I
ENSAMEG00000017837 Ailuropoda melanoleuca ENSAMEG00000017837 I
ENSP00000301727-D1 Bos grunniens ENSP00000301727-D1 I
E4F1 Tursiops truncatus ENSTTRG00000008208 I
ENSSTOG00000013171 Ictidomys tridecemlineatus ENSSTOG00000013171 I
E4F1 Sus scrofa ENSSSCG00000008047 I
E4f1 Rattus norvegicus ENSRNOG00000009224 I
E4F1 Pteropus vampyrus ENSPVAG00000005098 I
E4F1 Procavia capensis ENSPCAG00000004337 I
ENSPANG00000017016 Papio anubis ENSPANG00000017016 I
E4F1 Ochotona princeps ENSOPRG00000002573 I
E4F1 Otolemur garnettii ENSOGAG00000006594 I
E4F1 Oryctolagus cuniculus ENSOCUG00000025484 I
ENSOARG00000017910 Ovis aries ENSOARG00000017910 I
ENSNLEG00000009261 Nomascus leucogenys ENSNLEG00000009261 I
ENSMPUG00000015378 Mustela putorius furo ENSMPUG00000015378 I
E4F1 Macaca mulatta ENSMMUG00000019235 I
E4F1 Myotis lucifugus ENSMLUG00000016786 I
E4F1 Microcebus murinus ENSMICG00000005892 I
E4F1 Loxodonta africana ENSLAFG00000000725 I
E4F1 Gorilla gorilla ENSGGOG00000014241 I
E4F1 Equus caballus ENSECAG00000008036 I
E4f1 Dipodomys ordii ENSDORG00000001751 I
E4F1 Dasypus novemcinctus ENSDNOG00000016503 I
ENSCSAG00000010850 Chlorocebus sabaeus ENSCSAG00000010850 I
E4F1 Cavia porcellus ENSCPOG00000002052 I
E4F1 Callithrix jacchus ENSCJAG00000015000 I
E4F1 Bos taurus ENSBTAG00000009961 I