CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_1_chr1_3_0000687
(
Nectria haematococca
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pg.sca_1_chr1_3_0000687
T284886_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01706
M02344_2.00
Neurospora crassa
NNNAWYNNNN
NNNNRWTNNN
PBM
Weirauch et al.(2014)
pTH9662
0.859
0.964
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0000687
Myb
14
58
QSKWSPEEDALIIELRGSGMKWEDISKRLPGRSAISCRLHYQNYL
fgenesh1_pg.sca_1_chr1_3_0000687
Myb
61
100
RSEWDEERKNKLARLYERFKPEMWAKVAEEMAVPWRAAEA
Links
Other
Myb/SANT
family TFs
Other
Nectria haematococca
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MGG_04213
Magnaporthe oryzae
MGG_04213
N
e_gw1.26.261.1
Nectria haematococca
e_gw1.26.261.1
N
X797_000207
Metarhizium robertsii
X797_000207
N
TRIVIDRAFT_72912
Trichoderma virens
TRIVIDRAFT_72912
N
TRIATDRAFT_139614
Trichoderma atroviride
TRIATDRAFT_139614
N
THITE_2109345
Thielavia terrestris
THITE_2109345
N
S40288_03718
Stachybotrys chartarum
S40288_03718
N
S40285_04367
Stachybotrys chlorohalonata
S40285_04367
N
PV09_08631
Verruconis gallopava
PV09_08631
N
PFICI_14091
Pestalotiopsis fici
PFICI_14091
N
NechaG34650
Fusarium solani
NechaG34650
N
MYCTH_2051009
Myceliophthora thermophila
MYCTH_2051009
N
ACRE_031230
Acremonium chrysogenum
ACRE_031230
N
MAPG_05099
Magnaporthe poae
MAPG_05099
N
GLRG_06539
Colletotrichum graminicola
GLRG_06539
N
GGTG_08616
Gaeumannomyces graminis
GGTG_08616
N
FPSE_09281
Fusarium pseudograminearum
FPSE_09281
N
FGRRES_05370
Fusarium graminearum
FGRRES_05370
N
FFUJ_04612
Fusarium fujikuroi
FFUJ_04612
N
CTHT_0040160
Chaetomium thermophilum
CTHT_0040160
N
CSUB01_03675
Colletotrichum sublineola
CSUB01_03675
N
CHGG_09562
Chaetomium globosum
CHGG_09562
N
CFIO01_06863
Colletotrichum fioriniae
CFIO01_06863
N