fgenesh1_pg.scaffold_226000065 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pg.scaffold_226000065 T284901_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.685 0.702
AT2G40260
M07057_2.00 		Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD		 Dap-seq
OMalley et al.(2016)
AT2G40260_col_a 		0.676 0.702
AT2G40260
M07058_2.00 		Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN		 Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a 		0.676 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.scaffold_226000065 Myb 57 108

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015874 Ailuropoda melanoleuca ENSAMEG00000015874 I
ENSBTAG00000045616 Bos taurus ENSBTAG00000045616 I
ENSCAFG00000016520 Canis familiaris ENSCAFG00000016520 I
ENSCAFG00000016523 Canis familiaris ENSCAFG00000016523 I
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I
ENSMPUG00000018977 Mustela putorius furo ENSMPUG00000018977 I
ENSOARG00000004633 Ovis aries ENSOARG00000004633 I
ENSSTOG00000022212 Ictidomys tridecemlineatus ENSSTOG00000022212 I
ENSSTOG00000026413 Ictidomys tridecemlineatus ENSSTOG00000026413 I
ENSSTOG00000027979 Ictidomys tridecemlineatus ENSSTOG00000027979 I
ENSBTAG00000004151 Bos taurus ENSBTAG00000004151 N
ENSOARG00000005439 Ovis aries ENSOARG00000005439 N
ENSOARG00000005470 Ovis aries ENSOARG00000005470 N
ENSP00000228251-D4 Bos grunniens ENSP00000228251-D4 N