CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw1.2.1819.1
(
Fragilariopsis cylindrus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
gw1.2.1819.1
T285080_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Thaps24118
M02334_2.00
Thalassiosira pseudonana
NNAYCHDNN
NNHDGRTNN
PBM
Weirauch et al.(2014)
pTH7881
0.775
0.932
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.2.1819.1
Myb
1
44
RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Fragilariopsis cylindrus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Glis2
Mus musculus
ENSMUSG00000014303
D
GLIS2
Homo sapiens
ENSG00000126603
D
GLIS2
Oryctolagus cuniculus
ENSOCUG00000012971
I
GLIS2
Ornithorhynchus anatinus
ENSOANG00000010385
I
GLIS2
Otolemur garnettii
ENSOGAG00000015200
I
GLIS2
Ochotona princeps
ENSOPRG00000000484
I
GLIS2
Procavia capensis
ENSPCAG00000011063
I
ENSPPYG00000007055
Pongo abelii
ENSPPYG00000007055
I
GLIS2
Pan troglodytes
ENSPTRG00000007714
I
GLIS2
Pteropus vampyrus
ENSPVAG00000017802
I
Glis2
Rattus norvegicus
ENSRNOG00000004766
I
ENSSHAG00000010956
Sarcophilus harrisii
ENSSHAG00000010956
I
GLIS2
Sus scrofa
ENSSSCG00000023653
I
ENSSTOG00000025049
Ictidomys tridecemlineatus
ENSSTOG00000025049
I
glis2b
Tetraodon nigroviridis
ENSTNIG00000009741
I
GLIS2
Tursiops truncatus
ENSTTRG00000002711
I
SINV25327
Solenopsis invicta
SINV25327
I
SPU_010542
Strongylocentrotus purpuratus
SPU_010542
I
Alligator_sinensis_CCG004454.1
Alligator sinensis
Alligator_sinensis_CCG004454.1
I
Cmyd_10017688
Chelonia mydas
Cmyd_10017688
I
ENSBTAP00000012119-D1
Bos grunniens
ENSBTAP00000012119-D1
I
Myotis_brandtii_GLIS2_10028036
Myotis brandtii
Myotis_brandtii_GLIS2_10028036
I
Pvit_18995
Pogona vitticeps
Pvit_18995
I
glis2.L
Xenopus laevis
XB-GENE-6252690
I
GLIS2
Felis catus
ENSFCAG00000011229
I
ENSAMXG00000011871
Astyanax mexicanus
ENSAMXG00000011871
I
GLIS2
Bos taurus
ENSBTAG00000009199
I
GLIS2
Canis familiaris
ENSCAFG00000019227
I
GLIS2
Callithrix jacchus
ENSCJAG00000019770
I
ENSCSAG00000009593
Chlorocebus sabaeus
ENSCSAG00000009593
I
GLIS2
Dasypus novemcinctus
ENSDNOG00000010899
I
ENSDORG00000014886
Dipodomys ordii
ENSDORG00000014886
I
GLIS2
Equus caballus
ENSECAG00000020639
I
GLIS2
Erinaceus europaeus
ENSEEUG00000007346
I
GLIS2
Echinops telfairi
ENSETEG00000006418
I
ENSOARG00000003260
Ovis aries
ENSOARG00000003260
I
GLIS2
Gorilla gorilla
ENSGGOG00000004717
I
ENSLACG00000004164
Latimeria chalumnae
ENSLACG00000004164
I
GLIS2
Loxodonta africana
ENSLAFG00000018480
I
GLIS2
Microcebus murinus
ENSMICG00000017817
I
GLIS2
Myotis lucifugus
ENSMLUG00000008930
I
GLIS2
Monodelphis domestica
ENSMODG00000016375
I
ENSMPUG00000015020
Mustela putorius furo
ENSMPUG00000015020
I
ENSNLEG00000009834
Nomascus leucogenys
ENSNLEG00000009834
I
ENSAMEG00000002010
Ailuropoda melanoleuca
ENSAMEG00000002010
I