gw1.8.161.1 (Volvox carteri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.8.161.1 T285138_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.849 0.826
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.839 0.804
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.839 0.804
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.816 0.826
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.816 0.826
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.790 0.761
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.790 0.761
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.790 0.761
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.790 0.761
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.790 0.761
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.790 0.826
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.768 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.768 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.768 0.783
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.8.161.1 Myb 3 48

Links

Other Myb/SANT family TFs
Other Volvox carteri TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Stat4 Mus musculus ENSMUSG00000062939 D
STAT4 Homo sapiens ENSG00000138378 D
ENSOARG00000013903 Ovis aries ENSOARG00000013903 I
ENSCAFG00000009797 Canis familiaris ENSCAFG00000009797 I
STAT4 Oryctolagus cuniculus ENSOCUG00000002466 I
STAT4 Otolemur garnettii ENSOGAG00000003042 I
STAT4 Ochotona princeps ENSOPRG00000008636 I
ENSPANG00000022795 Papio anubis ENSPANG00000022795 I
ENSPPYG00000013028 Pongo abelii ENSPPYG00000013028 I
ENSPSIG00000010185 Pelodiscus sinensis ENSPSIG00000010185 I
STAT4 Pteropus vampyrus ENSPVAG00000004736 I
Stat1 Rattus norvegicus ENSRNOG00000014079 I
STAT4 Sus scrofa ENSSSCG00000016059 I
STAT4 Tursiops truncatus ENSTTRG00000001136 I
STAT4 Vicugna pacos ENSVPAG00000011545 I
Brh_R001450 Buceros rhinoceros Brh_R001450 I
ENSP00000351255-D1 Bos grunniens ENSP00000351255-D1 I
Tal_R001379 Tyto alba Tal_R001379 I
ENSOANG00000031223 Ornithorhynchus anatinus ENSOANG00000031223 I
ENSNLEG00000006726 Nomascus leucogenys ENSNLEG00000006726 I
ENSMPUG00000012539 Mustela putorius furo ENSMPUG00000012539 I
STAT4 Monodelphis domestica ENSMODG00000011767 I
STAT4 Macaca mulatta ENSMMUG00000005617 I
STAT4 Meleagris gallopavo ENSMGAG00000016413 I
STAT4 Loxodonta africana ENSLAFG00000012299 I
STAT4 Felis catus ENSFCAG00000018634 I
STAT4 Erinaceus europaeus ENSEEUG00000002778 I
STAT4 Equus caballus ENSECAG00000023170 I
Stat4 Dipodomys ordii ENSDORG00000011535 I
ENSCSAG00000012146 Chlorocebus sabaeus ENSCSAG00000012146 I
STAT4 Callithrix jacchus ENSCJAG00000005895 I
STAT4 Choloepus hoffmanni ENSCHOG00000006838 I
STAT1 Bos taurus ENSBTAG00000007867 I
XP_002937488 Xenopus tropicalis XP_002937488 N