Carubv10003097m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10003097m.g T286231_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.755 0.766
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.669 0.681
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.669 0.681
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.667 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003097m Myb 16 67

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

346 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THAP3 Pan troglodytes ENSPTRG00000000093 N
ENSOANG00000029971 Ornithorhynchus anatinus ENSOANG00000029971 N
ENSOARG00000011230 Ovis aries ENSOARG00000011230 N
THAP3 Oryctolagus cuniculus ENSOCUG00000008846 N
THAP3 Otolemur garnettii ENSOGAG00000029491 N
THAP3 Ochotona princeps ENSOPRG00000001961 N
ENSPANG00000000281 Papio anubis ENSPANG00000000281 N
ENSPPYG00000001935 Pongo abelii ENSPPYG00000001935 N
ENSPSIG00000004751 Pelodiscus sinensis ENSPSIG00000004751 N
ENSNLEG00000008620 Nomascus leucogenys ENSNLEG00000008620 N
THAP3 Pteropus vampyrus ENSPVAG00000013024 N
Thap3 Rattus norvegicus ENSRNOG00000026840 N
ENSSHAG00000008023 Sarcophilus harrisii ENSSHAG00000008023 N
ENSSTOG00000003655 Ictidomys tridecemlineatus ENSSTOG00000003655 N
THAP3 Tursiops truncatus ENSTTRG00000006348 N
ENSBTAP00000014893-D1 Bos grunniens ENSBTAP00000014893-D1 N
ENSP00000383703 Macaca fascicularis ENSP00000383703 N
Myotis_brandtii_THAP3_10024041 Myotis brandtii Myotis_brandtii_THAP3_10024041 N
THAP3 Felis catus ENSFCAG00000000662 N
THAP3 Bos taurus ENSBTAG00000011214 N
THAP3 Canis familiaris ENSCAFG00000019625 N
THAP3 Callithrix jacchus ENSCJAG00000000237 N
THAP3 Cavia porcellus ENSCPOG00000021946 N
ENSCSAG00000000749 Chlorocebus sabaeus ENSCSAG00000000749 N
THAP3 Dasypus novemcinctus ENSDNOG00000013851 N
THAP3 Equus caballus ENSECAG00000009778 N
THAP3 Erinaceus europaeus ENSEEUG00000003448 N
ENSAMEG00000009609 Ailuropoda melanoleuca ENSAMEG00000009609 N
THAP3 Homo sapiens ENSG00000041988 N
ENSGGOG00000006842 Gorilla gorilla ENSGGOG00000006842 N
THAP3 Loxodonta africana ENSLAFG00000015981 N
ENSMEUG00000002039 Macropus eugenii ENSMEUG00000002039 N
THAP3 Myotis lucifugus ENSMLUG00000029196 N
THAP3 Macaca mulatta ENSMMUG00000002047 N
THAP3 Monodelphis domestica ENSMODG00000005922 N
Thap3 Mus musculus ENSMUSG00000039759 N